RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DENND2DQ9H6A0 471 aaPredicted RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 SAMHD1Q9Y3Z3 626 aaKnown RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 MAGEC1O60732 1142 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 LINC00032P0C843 101 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 JAK1P23458 1154 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 CDK18Q07002 472 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 FSTL1Q12841 308 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 MZT2BQ6NZ67 158 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 CUZD1Q86UP6 607 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 ZNF671Q8TAW3 534 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 TLCD1Q96CP7 247 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 PTCH2Q9Y6C5 1203 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 SGTAO43765 313 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 LRCH4O75427 683 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 TPSB2P20231 275 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 MPSTP25325 297 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 ATN1P54259 1190 aaPredicted RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.3
LCA5-202ENST00000392959 TPSAB1Q15661 275 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 SETMARQ53H47 684 aaPredicted RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 ADGRD1Q6QNK2 874 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 DEFB128Q7Z7B8 93 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 USP7Q93009 1102 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 CLN6Q9NWW5 311 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 FADS3Q9Y5Q0 445 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 LPOP22079 712 aaPredicted RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 GSTM5P46439 218 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CPSF6Q16630 551 aaKnown RBP eCLIP13.18□□□□□ -0.3
LCA5-202ENST00000392959 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CAPSLQ8WWF8 208 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CD101Q93033 1021 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 UBE2E3Q969T4 207 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CDCA5Q96FF9 252 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 GORASP1Q9BQQ3 440 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 SLITRK2Q9H156 845 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 PCDHB12Q9Y5F1 795 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 SLC28A1O00337 649 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 MAPK8P45983 427 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 NDUFA5Q16718 116 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 ELMO1Q92556 727 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 TM6SF2Q9BZW4 377 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CCNB1IP1Q9NPC3 277 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 ZNHIT2Q9UHR6 403 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 TIPRLO75663 272 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 SLC22A3O75751 556 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 FAM155BO75949 473 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 ITGA2P17301 1181 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 TNNI3P19429 210 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CDKN2BP42772 138 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 ARMC8Q8IUR7 673 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 Q96MT0 163 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CSPG4P5Q96PW8 444 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 FGF1P05230 155 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 PSEN1P49768 467 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 PRKAG1P54619 331 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 GBE1Q04446 702 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 TRAP1Q12931 704 aaKnown RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 SGCGQ13326 291 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 LIN52Q52LA3 116 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 HECTD3Q5T447 861 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 PANX1Q96RD7 426 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
LCA5-202ENST00000392959 BPIFA1Q9NP55 256 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 LGALS13Q9UHV8 139 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 PSME2Q9UL46 239 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 LYVE1Q9Y5Y7 322 aa13.18□□□□□ -0.3
LCA5-202ENST00000392959 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 BBIP1A8MTZ0 92 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 OR6B1O95007 311 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 WARSP23381 471 aaKnown RBP13.17□□□□□ -0.3
LCA5-202ENST00000392959 ADRA1BP35368 520 aa13.17□□□□□ -0.3
LCA5-202ENST00000392959 HIRAP54198 1017 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms