RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ASPHQ12797 758 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 FAM83EQ2M2I3 478 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 FSCBQ5H9T9 825 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 METTL21CQ5VZV1 264 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 SEL1L3Q68CR1 1132 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 KIAA1841Q6NSI8 718 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 KLHDC10Q6PID8 442 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 CCNYL1Q8N7R7 359 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 TSPAN17Q96FV3 270 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 TBATAQ96M53 351 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 SPON2Q9BUD6 331 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 WDR55Q9H6Y2 383 aaPredicted RBP25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 SUDS3Q9H7L9 328 aaPredicted RBP25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 AFF4Q9UHB7 1163 aaKnown RBP25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 ARL5AQ9Y689 179 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 GOLGA8QA0A0J9YX86 632 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 GOLGA8OA6NCC3 632 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 GOLGA8NF8WBI6 632 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 BUD23O43709 281 aaKnown RBP25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 SERPINF2P08697 491 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 RPSAP08865 295 aaKnown RBP25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 GLDCP23378 1020 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 SLC25A3Q00325 362 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 ACVR1Q04771 509 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 BTG3Q14201 252 aaPredicted RBP25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 PTPRCAPQ14761 206 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 SLC14A2Q15849 920 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 TECRLQ5HYJ1 363 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 RNF135Q8IUD6 432 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 MGME1Q9BQP7 344 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 GPAMQ9HCL2 828 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 GKN1Q9NS71 199 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 MICAL3Q7RTP6 2002 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 NAA25Q14CX7 972 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 RCN1Q15293 331 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 LMNTD2Q8IXW0 634 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 PDCD6IPQ8WUM4 868 aaKnown RBP25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 PLD4Q96BZ4 506 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 CMTM5Q96DZ9 223 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 DNAJC1Q96KC8 554 aaKnown RBP25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 PPP1R36Q96LQ0 422 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 POMKQ9H5K3 350 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 RETREG1Q9H6L5 497 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 PAK6Q9NQU5 681 aaPredicted RBP25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 VWA7Q9Y334 891 aa25.73■■□□□ 1.71
SMARCD3-203ENST00000392811 NEMP2A6NFY4 417 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 NEMP1O14524 444 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 STC2O76061 302 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 PSMG1O95456 288 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 LTA4HP09960 611 aaKnown RBP25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 PIRTP0C851 137 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 CCDC166P0CW27 439 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 ATP5F1P24539 256 aaPredicted RBP25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 CORO1AP31146 461 aaKnown RBP25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 VEGFBP49765 207 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 SGSHP51688 502 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 AGAP9Q5VTM2 703 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 NET1Q7Z628 596 aaPredicted RBP25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 BBS5Q8N3I7 341 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 SEPT3Q9UH03 358 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 SLC7A8Q9UHI5 535 aa25.72■■□□□ 1.71
SMARCD3-203ENST00000392811 NPHS1O60500 1241 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 PTDSS1P48651 473 aaKnown RBP25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 CDKN2DP55273 166 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 OXCT1P55809 520 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 DNAJB13P59910 316 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 KLF10Q13118 480 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 UBXN10Q96LJ8 280 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 TRIB3Q96RU7 358 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 OSBPL1AQ9BXW6 950 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 NUF2Q9BZD4 464 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 TRPM5Q9NZQ8 1165 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 UBA2Q9UBT2 640 aaPredicted RBP25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 VTI1BQ9UEU0 232 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 KDELR3O43731 214 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 CLDN11O75508 207 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 CIB2O75838 187 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 GOT2P00505 430 aaKnown RBP25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 EPHA3P29320 983 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 RGRP47804 291 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 PFKPQ01813 784 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 LAMB3Q13751 1172 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 TRIM67Q6ZTA4 783 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 ZNF461Q8TAF7 563 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 BRSK1Q8TDC3 778 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 ANKRD49Q8WVL7 239 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 SCG3Q8WXD2 468 aaKnown RBP25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 PEX13Q92968 403 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 STMN2Q93045 179 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 NSMCE3Q96MG7 304 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 PSKH2Q96QS6 385 aa25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 CINPQ9BW66 212 aaPredicted RBP25.71■■□□□ 1.71
SMARCD3-203ENST00000392811 A0A088AWK7 358 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 LOC100653049A0A140TA62 436 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 SLCO1B7G3V0H7 640 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 KRT34O76011 436 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 ABLIM3O94929 683 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 NDST3O95803 873 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 LSM12Q3MHD2 195 aaKnown RBP25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 PIWIL4Q7Z3Z4 852 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms