RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 NR1H2P55055 460 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 RNASEH2BQ5TBB1 312 aaKnown RBP19.14■□□□□ 0.66
CCDC50-202ENST00000392456 DHDDSQ86SQ9 333 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 ZNF398Q8TD17 642 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 HCAR2Q8TDS4 363 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 ZBP1Q9H171 429 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 IFT52Q9Y366 437 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 PCDHGA3Q9Y5H0 932 aa19.14■□□□□ 0.66
CCDC50-202ENST00000392456 TLR5O60602 858 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 FKBP6O75344 327 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 PPM1AP35813 382 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 ERVFC1P60507 584 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 FOLH1Q04609 750 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 LRRC36Q1X8D7 754 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 ZNF829Q3KNS6 432 aaPredicted RBP19.14■□□□□ 0.65
CCDC50-202ENST00000392456 FAM109BQ6ICB4 259 aaPredicted RBP19.14■□□□□ 0.65
CCDC50-202ENST00000392456 RWDD4Q6NW29 188 aaKnown RBP19.14■□□□□ 0.65
CCDC50-202ENST00000392456 TMC7Q7Z402 723 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 ELMOD1Q8N336 334 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 CALML6Q8TD86 181 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 HERVK_113Q902F9 699 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 CPT1BQ92523 772 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 SERPINB11Q96P15 392 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 RAD9AQ99638 391 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 HS3ST4Q9Y661 456 aa19.14■□□□□ 0.65
CCDC50-202ENST00000392456 BCLAF3A2AJT9 711 aaKnown RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 GRXCR1A8MXD5 290 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 DDX5P17844 614 aaKnown RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 DNAJB1P25685 340 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 NR2C2P49116 596 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 TWF1Q12792 350 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 EFTUD2Q15029 972 aaKnown RBP eCLIP19.13■□□□□ 0.653e-6■□□□□ 11.1
CCDC50-202ENST00000392456 BRMS1LQ5PSV4 323 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 FAXCQ5TGI0 409 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PIK3R6Q5UE93 754 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 LPCAT4Q643R3 524 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 TPGS2Q68CL5 300 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 NANOGP8Q6NSW7 305 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PSRC1Q6PGN9 363 aaPredicted RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 TTC30BQ8N4P2 665 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 ZNF512Q96ME7 567 aaPredicted RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 CEP41Q9BYV8 373 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 OSBPL2Q9H1P3 480 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PRDM12Q9H4Q4 367 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 NDFIP2Q9NV92 336 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 MARCH2Q9P0N8 246 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 TLR6Q9Y2C9 796 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PCDHGA11Q9Y5H2 935 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 TBX4P57082 545 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PPP2R5DQ14738 602 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PAFAH1B3Q15102 231 aaKnown RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 HP1BP3Q5SSJ5 553 aaPredicted RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 AHI1Q8N157 1196 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 DEPDC1BQ8WUY9 529 aa19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PAIP1Q9H074 479 aaKnown RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 FARP1Q9Y4F1 1045 aaPredicted RBP19.13■□□□□ 0.65
CCDC50-202ENST00000392456 PRRG1O14668 218 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 ALOX15BO15296 676 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 DENRO43583 198 aaKnown RBP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 SULT1C4O75897 302 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 ZBTB11O95625 1053 aaPredicted RBP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 CTSAP10619 480 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 HCAR3P49019 387 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 ATP1A4Q13733 1029 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 TLR1Q15399 786 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 AAGABQ6PD74 315 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 PDZD8Q8NEN9 1154 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 CELF6Q96J87 481 aaKnown RBP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 C17orf80Q9BSJ5 609 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 MPP6Q9NZW5 540 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 MYO18AQ92614 2054 aaKnown RBP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 C5orf42Q9H799 3197 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 SLC12A8A0AV02 714 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 ZNF840PA6NDX5 716 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 HIDE1A8MVS5 230 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 F5H423 210 aaPredicted RBP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 TGM5O43548 720 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 KRT75O95678 551 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 CRYZL1O95825 349 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 KCNQ1P51787 676 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 TIGD2Q4W5G0 525 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 C9orf50Q5SZB4 431 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 C6orf163Q5TEZ5 329 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 OGFOD2Q6N063 350 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 LSMEM1Q8N8F7 131 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 SP7Q8TDD2 431 aaPredicted RBP19.12■□□□□ 0.65
CCDC50-202ENST00000392456 QKIQ96PU8 341 aaKnown RBP eCLIP19.12■□□□□ 0.659e-12■■■■■ 44.2
CCDC50-202ENST00000392456 ZNF304Q9HCX3 659 aa19.12■□□□□ 0.65
CCDC50-202ENST00000392456 TRANK1O15050 2925 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 PLXNA4Q9HCM2 1894 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 BANF1O75531 89 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 RSL1D1O76021 490 aaKnown RBP19.11■□□□□ 0.65
CCDC50-202ENST00000392456 TMEM63AO94886 807 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 CXCL14O95715 111 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 ALDH1A3P47895 512 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 ERFP50548 548 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 HNRNPFP52597 415 aaKnown RBP19.11■□□□□ 0.65
CCDC50-202ENST00000392456 PLD1Q13393 1074 aa19.11■□□□□ 0.65
CCDC50-202ENST00000392456 RNF111Q6ZNA4 994 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms