RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 ARIH1Q9Y4X5 557 aaPredicted RBP25.55■■□□□ 1.68
HOMER3-202ENST00000392351 LRRK1Q38SD2 2015 aa25.55■■□□□ 1.68
HOMER3-202ENST00000392351 USP34Q70CQ2 3546 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 MYO15AQ9UKN7 3530 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3DA0A087WVF3 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3IA0A087WXS9 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3EA0A087X179 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3KA0A087X1G2 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3FA6NER0 549 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3LB9A6J9 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 NEMP1O14524 444 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 AREL1O15033 823 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 SPINT1O43278 529 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 AP1G1O43747 822 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 ECEL1O95672 775 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 GAS8O95995 478 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3HP0C7X1 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 SUOXP51687 545 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 CKAP4Q07065 602 aaKnown RBP25.54■■□□□ 1.68
HOMER3-202ENST00000392351 GALNT3Q14435 633 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3GQ6DHY5 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3CQ6IPX1 549 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 ERAP2Q6P179 960 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TBC1D3Q8IZP1 549 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-202ENST00000392351 SPATA4Q8NEY3 305 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 OR2T34Q8NGX1 318 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 MRGPRX2Q96LB1 330 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 TRIB3Q96RU7 358 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 ADGRE3Q9BY15 652 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 C6orf106Q9H6K1 298 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-202ENST00000392351 PREBQ9HCU5 417 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 PCYOX1Q9UHG3 505 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 MRFAP1Q9Y605 127 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 GON4LQ3T8J9 2241 aa25.54■■□□□ 1.68
HOMER3-202ENST00000392351 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 ZNF500O60304 480 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-202ENST00000392351 PCDH8O95206 1070 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 KRT14P02533 472 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 TNNT3P45378 269 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-202ENST00000392351 RPL26P61254 145 aaKnown RBP25.53■■□□□ 1.68
HOMER3-202ENST00000392351 FAM193AP78312 1265 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 ELP6Q0PNE2 266 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 SIM2Q14190 667 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-202ENST00000392351 WHAMMP3Q1A5X7 153 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 TMEFF1Q8IYR6 380 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 DEFB119Q8N690 84 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 ATOH1Q92858 354 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-202ENST00000392351 RMDN1Q96DB5 314 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 FEM1CQ96JP0 617 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 IRF2BPLQ9H1B7 796 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 RAB6BQ9NRW1 208 aa25.53■■□□□ 1.68
HOMER3-202ENST00000392351 RPL26L1Q9UNX3 145 aaKnown RBP25.53■■□□□ 1.68
HOMER3-202ENST00000392351 GOLGA6CA6NDK9 693 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 GOLGA6BA6NDN3 693 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 RIOK3O14730 519 aaKnown RBP25.52■■□□□ 1.68
HOMER3-202ENST00000392351 GOLGA6DP0CG33 693 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 CTPS1P17812 591 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 FDFT1P37268 417 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 VPS41P49754 854 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 SEMG2Q02383 582 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 C4orf22Q6V702 233 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 PRR23BQ6ZRT6 265 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 NDUFAF2Q8N183 169 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 ETNK1Q9HBU6 452 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 GOLGA6AQ9NYA3 693 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 DMDP11532 3685 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 TSPAN6O43657 245 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 NFKBIAP25963 317 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 MMP12P39900 470 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 GRIA4P48058 902 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 C2orf54Q08AI8 447 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 TUBB2AQ13885 445 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 PLK5Q496M5 336 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 SYCP2LQ5T4T6 812 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 USP45Q70EL2 814 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 LPCAT2Q7L5N7 544 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 ZNF572Q7Z3I7 529 aaPredicted RBP25.52■■□□□ 1.68
HOMER3-202ENST00000392351 RUNDC3BQ96NL0 473 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 TUBB2BQ9BVA1 445 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 FICDQ9BVA6 458 aa25.52■■□□□ 1.68
HOMER3-202ENST00000392351 DUSP15Q9H1R2 295 aaPredicted RBP25.52■■□□□ 1.68
HOMER3-202ENST00000392351 A0A0J9YYE9 177 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 LOC285095A0A1B0GVY8 99 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 ANKRD66B4E2M5 251 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 NDST3O95803 873 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 TRBC1P01850 177 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 ALPIP09923 528 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 PPP2CBP62714 309 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 PPP2CAP67775 309 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 PTPRRQ15256 657 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 PPP1R7Q15435 360 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 ELF2Q15723 593 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 PMS2CLQ68D20 193 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 CCDC70Q6NSX1 233 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 KLHDC8BQ8IXV7 354 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 PDCD7Q8N8D1 485 aaKnown RBP25.51■■□□□ 1.67
HOMER3-202ENST00000392351 CADM4Q8NFZ8 388 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 SLCO2A1Q92959 643 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 SCRN2Q96FV2 425 aa25.51■■□□□ 1.67
HOMER3-202ENST00000392351 SMIM14Q96QK8 99 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms