RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 RBM15Q96T37 977 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■□□□ 11.4
SOD1-202ENST00000389995 C1QTNF7Q9BXJ2 289 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 SRRTQ9BXP5 876 aaKnown RBP11.91□□□□□ -0.5
SOD1-202ENST00000389995 ZYG11BQ9C0D3 744 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 TMEM168Q9H0V1 697 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 DPEP2Q9H4A9 486 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
SOD1-202ENST00000389995 RMND1Q9NWS8 449 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 KCNK4Q9NYG8 393 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 B3GALT1Q9Y5Z6 326 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 DOPEY1Q5JWR5 2465 aa11.91□□□□□ -0.5
SOD1-202ENST00000389995 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 TMEM202A6NGA9 273 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 P4HA2O15460 535 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 POP4O95707 220 aaKnown RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 TNFP01375 233 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 PNMA6AP0CW24 399 aaPredicted RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 CD82P27701 267 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 HTR1BP28222 390 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 ALDH4A1P30038 563 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 UGT1A3P35503 534 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 PEX5P50542 639 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 ATP1A2P50993 1020 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 MLLT10P55197 1068 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 SNRPD1P62314 119 aaKnown RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.5
SOD1-202ENST00000389995 POLD3Q15054 466 aaPredicted RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 C14orf28Q4W4Y0 310 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 COBLL1Q53SF7 1204 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 SPECC1LQ69YQ0 1117 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 OGFOD3Q6PK18 319 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 ZNF783Q6ZMS7 281 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 PIM3Q86V86 326 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 FAM131BQ86XD5 332 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 ARHGEF2Q92974 986 aaKnown RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 ART4Q93070 314 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 ISG20Q96AZ6 181 aaKnown RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 CCDC74BQ96LY2 380 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 CEP63Q96MT8 703 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 WDR92Q96MX6 357 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 FGF22Q9HCT0 170 aa11.9□□□□□ -0.5
SOD1-202ENST00000389995 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 AJAP1Q9UKB5 411 aaPredicted RBP11.9□□□□□ -0.5
SOD1-202ENST00000389995 IGHV5-10-1A0A0J9YXX1 117 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 TMEM110-MUSTN1A8MSY1 372 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 K7EM74 188 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 TOR1BO14657 336 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 PIGNO95427 931 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 GSRP00390 522 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 SLC9A1P19634 815 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 FLT3P36888 993 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 NKAIN2Q5VXU1 208 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 RWDD4Q6NW29 188 aaKnown RBP11.89□□□□□ -0.51
SOD1-202ENST00000389995 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 UNC5BQ8IZJ1 945 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 CACNA2D3Q8IZS8 1091 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
SOD1-202ENST00000389995 NT5C3BQ969T7 300 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 MIB2Q96AX9 1013 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 RNF31Q96EP0 1072 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 EXOC2Q96KP1 924 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 CFAP57Q96MR6 1250 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 TAAR9Q96RI9 348 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 OSBPL1AQ9BXW6 950 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 SPATS2LQ9NUQ6 558 aaKnown RBP11.89□□□□□ -0.51
SOD1-202ENST00000389995 MOSPD1Q9UJG1 213 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 STAP1Q9ULZ2 295 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 PCDHGC3Q9UN70 934 aa11.89□□□□□ -0.51
SOD1-202ENST00000389995 FAM72CH0Y354 149 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 PSMA7O14818 248 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 TMCC1O94876 653 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 CPNE6O95741 557 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 KRT7P08729 469 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 PNLIPP16233 465 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 OAS2P29728 719 aaKnown RBP11.88□□□□□ -0.51
SOD1-202ENST00000389995 LIG3P49916 1009 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 STX17P56962 302 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 DEFB109BQ30KR1 87 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 SLC25A52Q3SY17 297 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 TMEM52BQ4KMG9 183 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 FAM102AQ5T9C2 384 aaPredicted RBP11.88□□□□□ -0.51
SOD1-202ENST00000389995 FAM72AQ5TYM5 149 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 FAM72DQ6L9T8 149 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 PHLDB2Q86SQ0 1253 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 SLC47A2Q86VL8 602 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 FAM72BQ86X60 149 aa11.88□□□□□ -0.51
SOD1-202ENST00000389995 ZNF354CQ86Y25 554 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms