RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 AGKQ53H12 422 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 DDIASQ8IXT1 998 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 ANKRD52Q8NB46 1076 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 URGCPQ8TCY9 931 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 MCRS1Q96EZ8 462 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 BTN2A3PQ96KV6 586 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 IL12RB2Q99665 862 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 CNPY3Q9BT09 278 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 NIF3L1Q9GZT8 377 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 TRIT1Q9H3H1 467 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 POLE4Q9NR33 117 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 PCDHGA11Q9Y5H2 935 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 AQP12BA6NM10 295 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TMEM233B4DJY2 109 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 F5H423 210 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TK2O00142 265 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TOR1BO14657 336 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 MRASO14807 208 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 PRPSAP2O60256 369 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 ABCB7O75027 752 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 PGK2P07205 417 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 F7P08709 466 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 EMC2Q15006 297 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 NOL9Q5SY16 702 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 FAM45BPQ6NSW5 357 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 ARMC8Q8IUR7 673 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 AQP12AQ8IXF9 295 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 KIAA2013Q8IYS2 634 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 FAM45AQ8TCE6 357 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TP53INP1Q96A56 240 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 CERS2Q96G23 380 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 MAGED4Q96JG8 741 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 RNF38Q9H0F5 515 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TBC1D13Q9NVG8 400 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 MORF4L1Q9UBU8 362 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 MID2Q9UJV3 735 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 OTOFQ9HC10 1997 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 M0QX08 132 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 DGAT1O75907 488 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 CABYRO75952 493 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 EDN1P05305 212 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 SUPT20HL2P0C7V6 817 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 BMP4P12644 408 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 CD19P15391 556 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 AXLP30530 894 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 RPS9P46781 194 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 CSE1LP55060 971 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 FASTKQ14296 549 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 STXBP2Q15833 593 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 CARTPTQ16568 116 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 C15orf59Q2T9L4 293 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TRNP1Q6NT89 227 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 STRA8Q7Z7C7 330 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 LINC00523Q86TU6 105 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 C11orf74Q86VG3 221 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 SPPL2CQ8IUH8 684 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 ZCCHC7Q8N3Z6 543 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 HDAC10Q969S8 669 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 NAT9Q9BTE0 207 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 DNAI2Q9GZS0 605 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 MARCH7Q9H992 704 aa14.74□□□□□ -0.05
VPS9D1-201ENST00000389386 TIMM44O43615 452 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 UGT2B11O75310 529 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SRP72O76094 671 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 APOA4P06727 396 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SNRPB2P08579 225 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 GSTM2P28161 218 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SERPINB1P30740 379 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 INPP5AQ14642 412 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SLX4IPQ5VYV7 408 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 HACD2Q6Y1H2 254 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SLCO6A1Q86UG4 719 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 DCP2Q8IU60 420 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 GABPB2Q8TAK5 448 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 RDH11Q8TC12 318 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 HDAC11Q96DB2 347 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 YME1L1Q96TA2 773 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC39A3Q9BRY0 314 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 ZNF302Q9NR11 478 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 PDLIM7Q9NR12 457 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SYBUQ9NX95 663 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 CCDC167Q9P0B6 97 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 TBC1D14Q9P2M4 693 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 ENPP5Q9UJA9 477 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 LCTP09848 1927 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 TRPC5OSA6NMA1 111 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC22A1O15245 554 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 PARNO95453 639 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 NAT2P11245 290 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 ABCG1P45844 678 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 OAZ1P54368 228 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 GBE1Q04446 702 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 LY6KQ17RY6 165 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 TAS2R42Q7RTR8 314 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 MAGEE2Q8TD90 523 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 MYRFLQ96LU7 910 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 FCRL3Q96P31 734 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 ADPGKQ9BRR6 497 aa14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 TARS2Q9BW92 718 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-201ENST00000389386 SNX25Q9H3E2 840 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms