RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SYNCQ9H7C4 482 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 CYP4F12Q9HCS2 524 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 OCIAD1Q9NX40 245 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.73□□□□□ -0.85
IFT88-203ENST00000389373 HPCAL4Q9UM19 191 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 TMEM202A6NGA9 273 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 TTLL8A6PVC2 850 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 I6L893 689 aaPredicted RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 HGSO14964 777 aaPredicted RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 ZW10O43264 779 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 SEMA7AO75326 666 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 GSRP00390 522 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 ERBB2P04626 1255 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 TCN2P20062 427 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 SLC6A3Q01959 620 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 DCAF12Q5T6F0 453 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 OTUD1Q5VV17 481 aaPredicted RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 ANKS6Q68DC2 871 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 CAPRIN2Q6IMN6 1127 aaKnown RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 RWDD4Q6NW29 188 aaKnown RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 SRRM1Q8IYB3 904 aaKnown RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 PLA2G15Q8NCC3 412 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 AGBL5Q8NDL9 886 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 OR56A4Q8NGH8 313 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 KIAA1524Q8TCG1 905 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 ARHGEF2Q92974 986 aaKnown RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 SPATA32Q96LK8 384 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 C1orf74Q96LT6 269 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 TBCBQ99426 244 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 NPY6RQ99463 290 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 CTRCQ99895 268 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 ASPSCR1Q9BZE9 553 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 INTS2Q9H0H0 1204 aaKnown RBP9.72□□□□□ -0.85
IFT88-203ENST00000389373 PRDM8Q9NQV8 689 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 DNAI1Q9UI46 699 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 STAP1Q9ULZ2 295 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 PCDHGA3Q9Y5H0 932 aa9.72□□□□□ -0.85
IFT88-203ENST00000389373 UNC13CQ8NB66 2214 aa9.71□□□□□ -0.85
IFT88-203ENST00000389373 A8MU76 341 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 MKRN2OSH3BPM6 223 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 CACNB4O00305 520 aaPredicted RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 BUB1O43683 1085 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 F9P00740 461 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 RNF224P0DH78 156 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 MAP4P27816 1152 aaKnown RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 CD1CP29017 333 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 LIMK2P53671 638 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 GEMIN4P57678 1058 aaKnown RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 ELP6Q0PNE2 266 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 PNOCQ13519 176 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 MEA1Q16626 185 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 SNAP47Q5SQN1 464 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 OLFML1Q6UWY5 402 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 ASB18Q6ZVZ8 466 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 NLGN4XQ8N0W4 816 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 C1orf131Q8NDD1 294 aaKnown RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 NLGN4YQ8NFZ3 816 aaPredicted RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 ZDHHC1Q8WTX9 485 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 RNF31Q96EP0 1072 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 HMCESQ96FZ2 354 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 PHF12Q96QT6 1004 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 NCAPGQ9BPX3 1015 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 EFHD1Q9BUP0 239 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 DDA1Q9BW61 102 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 FGF22Q9HCT0 170 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 CASS4Q9NQ75 786 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 SPATS2LQ9NUQ6 558 aaKnown RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 RRN3Q9NYV6 651 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 CNTN6Q9UQ52 1028 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 MRPS18BQ9Y676 258 aaKnown RBP9.71□□□□□ -0.86
IFT88-203ENST00000389373 DGKBQ9Y6T7 804 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 SDK2Q58EX2 2172 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 BSNQ9UPA5 3926 aa9.71□□□□□ -0.86
IFT88-203ENST00000389373 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
IFT88-203ENST00000389373 IGLV3-10A0A075B6K4 115 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PMM2O15305 246 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 P4HA2O15460 535 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 INSIG1O15503 277 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 TEX33O43247 280 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 TMCC1O94876 653 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 ZNF202O95125 648 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PIGNO95427 931 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 ECEL1O95672 775 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 IGSF6O95976 241 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 PRKCGP05129 697 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 HSP90AA1P07900 732 aaKnown RBP9.7□□□□□ -0.86
IFT88-203ENST00000389373 ETFBP38117 255 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 NOP2P46087 812 aaKnown RBP9.7□□□□□ -0.86
IFT88-203ENST00000389373 LIG3P49916 1009 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 COPB1P53618 953 aaKnown RBP9.7□□□□□ -0.86
IFT88-203ENST00000389373 SNX16P57768 344 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 RHOAP61586 193 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 MC1RQ01726 317 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 MTM1Q13496 603 aa9.7□□□□□ -0.86
IFT88-203ENST00000389373 TRA2AQ13595 282 aaKnown RBP eCLIP9.7□□□□□ -0.86
IFT88-203ENST00000389373 ZNF658Q5TYW1 1059 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms