RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TRAF3Q13114 568 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 GPR162Q16538 588 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 RAB6CQ53S08 254 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLC26A9Q7LBE3 791 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 UTP15Q8TED0 518 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HEXDCQ8WVB3 486 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 RAB6CQ9H0N0 254 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 USP29Q9HBJ7 922 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CNOT6Q9ULM6 557 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CAB39Q9Y376 341 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 TIMM22Q9Y584 194 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 A0A1W2PPW3 197 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 CST1P01037 141 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 BDNFP23560 247 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 OR56A4Q8NGH8 313 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 HTRA1Q92743 480 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 ASB9Q96DX5 294 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 CENPNQ96H22 339 aaPredicted RBP13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 SH3GL1Q99961 368 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 GOLGA2P5Q9HBQ8 144 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 PLK2Q9NYY3 685 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 INVSQ9Y283 1065 aa13.21□□□□□ -0.3
TRAPPC9-201ENST00000389328 BOLA2-SMG1P6H3BVE0 249 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 MSCO60682 206 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC7A1P30825 629 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 STT3AP46977 705 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 GPR158Q5T848 1215 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 TBC1D21Q8IYX1 336 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 ANKRD13AQ8IZ07 590 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 OR9I1Q8NGQ6 314 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 BHMTQ93088 406 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 DHRS4L1P0CG22 281 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 DBTP11182 482 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 PTPN3P26045 913 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CSTF3Q12996 717 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF846Q147U1 533 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 DNAJB3Q8WWF6 145 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 C12orf43Q96C57 262 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 NIFKQ9BYG3 293 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CACYBPQ9HB71 228 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 PARVBQ9HBI1 364 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZC4H2Q9NQZ6 224 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 OAZ3Q9UMX2 235 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 SNX10Q9Y5X0 201 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 TAF4O00268 1085 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZBTB14O43829 449 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CPSF4O95639 269 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 LGALS2P05162 132 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CYP4B1P13584 511 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 MERTKQ12866 999 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 OGFOD2Q6N063 350 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 PGLYRP2Q96PD5 576 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 ASB2Q96Q27 587 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CINPQ9BW66 212 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 SENP6Q9GZR1 1112 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 TMPRSS4Q9NRS4 437 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 ITGB1BP2Q9UKP3 347 aa13.2□□□□□ -0.3
TRAPPC9-201ENST00000389328 CNOT3O75175 753 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 RNASEH2AO75792 299 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 MED26O95402 600 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ALDH4A1P30038 563 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 CDK18Q07002 472 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 PRKG2Q13237 762 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 MARVELD2Q8N4S9 558 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 STAG3L4Q8TBR4 150 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 MUC3BQ9H195 1237 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 C3orf18Q9UK00 162 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SEC22BO75396 215 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 BCAS2O75934 225 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZBTB48P10074 688 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 MTHFD1P11586 935 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 COL6A2P12110 1019 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 HDCP19113 662 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 PTPN9P43378 593 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 LHX1P48742 406 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 WNT3AP56704 352 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 LIPEQ05469 1076 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 CTC1Q2NKJ3 1217 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ARMC4Q5T2S8 1044 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 CCDC80Q76M96 950 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SEPT5Q99719 369 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 GBA2Q9HCG7 927 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 PRG3Q9Y2Y8 225 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms