RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SNAP91O60641 907 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 GLI1P08151 1106 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 FSHRP23945 695 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LTKP29376 864 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 XIAPP98170 497 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 WDR59Q6PJI9 974 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PLEKHH3Q7Z736 793 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 OR8H3Q8N146 312 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 STAG3L4Q8TBR4 150 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 DNAJA4Q8WW22 397 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 PTCD3Q96EY7 689 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SERPINB11Q96P15 392 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SPATA9Q9BWV2 254 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TMEM165Q9HC07 324 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 DNAJC11Q9NVH1 559 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZNF221Q9UK13 617 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 NUP50Q9UKX7 468 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CNOT6Q9ULM6 557 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 PCDHA11Q9Y5I1 949 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 FAM86C2PA6NEL3 165 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 RFXANKO14593 260 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 NRP2O60462 931 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 IL1BP01584 269 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 GMPSP49915 693 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SOX10P56693 466 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LAMTOR4Q0VGL1 99 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZNF234Q14588 700 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 HSDL1Q3SXM5 330 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 KYAT3Q6YP21 454 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 ATXN2LQ8WWM7 1075 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZKSCAN4Q969J2 545 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 FUT8Q9BYC5 575 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PDGFDQ9GZP0 370 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 EHD1Q9H4M9 534 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SPAG4Q9NPE6 437 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TRPV5Q9NQA5 729 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 KANSL3Q9P2N6 904 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ITGA11Q9UKX5 1188 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 KIF1BO60333 1816 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 UBE2Q2LH0YL09 131 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 OR1I1O60431 355 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LDOC1O95751 146 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 LTA4HP09960 611 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SLC12A3P55017 1021 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 GALNT18Q6P9A2 607 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 POLNQ7Z5Q5 900 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SFRP1Q8N474 314 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PTGR2Q8N8N7 351 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 MINDY2Q8NBR6 621 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LSM14AQ8ND56 463 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 LENG1Q96BZ8 264 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 MROH8Q9H579 483 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ELAC1Q9H777 363 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 UXTQ9UBK9 157 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SNX7Q9UNH6 387 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PCDHGB3Q9Y5G1 929 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 BHMG1C9JSJ3 638 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 UGT2B17O75795 530 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 KDM4BO94953 1096 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 HMGCRP04035 888 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PGAM2P15259 253 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CES1P23141 567 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CDK9P50750 372 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 GTF2A2P52657 109 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 HERVK_113P62684 666 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 UBAP2LQ14157 1087 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 CWF19L1Q69YN2 538 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 KCNT2Q6UVM3 1135 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TMPRSS11AQ6ZMR5 421 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SAMD7Q7Z3H4 446 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 GALNT7Q86SF2 657 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ANKRD13AQ8IZ07 590 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 OR52E6Q96RD3 313 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 MCMBPQ9BTE3 642 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 IDI2Q9BXS1 227 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 DEFB129Q9H1M3 183 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SETD4Q9NVD3 440 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 NINJ2Q9NZG7 142 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CIDEBQ9UHD4 219 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LRIG2O94898 1065 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PSMB4P28070 264 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PTENP60484 403 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TXNL4AP83876 142 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 NFIXQ14938 502 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 MEA1Q16626 185 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TYSND1Q2T9J0 566 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TNFAIP8L3Q5GJ75 292 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CHST15Q7LFX5 561 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZNF571Q7Z3V5 609 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 UBE2J2Q8N2K1 259 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 C2orf73Q8N5S3 287 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 PCSK9Q8NBP7 692 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 MBOAT7Q96N66 472 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TEFMQ96QE5 360 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 TM6SF2Q9BZW4 377 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 WDR12Q9GZL7 423 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SAR1AQ9NR31 198 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 DNPEPQ9ULA0 475 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ACTL7BQ9Y614 415 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms