RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 PAOXQ6QHF9 649 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TERB1Q8NA31 727 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 COLGALT1Q8NBJ5 622 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 KLHL32Q96NJ5 620 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 GATA5Q9BWX5 397 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 OXCT2Q9BYC2 517 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 LRRC40Q9H9A6 602 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SLC17A6Q9P2U8 582 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ANKRD6Q9Y2G4 727 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 RNF11Q9Y3C5 154 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 FAM72CH0Y354 149 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 I6L893 689 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TNFRSF10BO14763 440 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CFLARO15519 480 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CLASP2O75122 1294 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 VAPBO95292 243 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PORP16435 677 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TFEBP19484 476 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TTKP33981 857 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 GRIK1P39086 918 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SLC5A3P53794 718 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CSE1LP55060 971 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PKNOX1P55347 436 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TPI1P60174 286 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SLC39A12Q504Y0 691 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SLC44A4Q53GD3 710 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 FAM72AQ5TYM5 149 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 FAM72DQ6L9T8 149 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 FSTL4Q6MZW2 842 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PDZD4Q76G19 769 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CMC1Q7Z7K0 106 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TAC4Q86UU9 113 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 FAM72BQ86X60 149 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 SCAMP5Q8TAC9 235 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ADAMTS16Q8TE57 1224 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 DQX1Q8TE96 717 aaKnown RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 LRRN4Q8WUT4 740 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 FUBP3Q96I24 572 aaKnown RBP eCLIP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 UHRF1Q96T88 793 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 WDCPQ9H6R7 721 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 PAK6Q9NQU5 681 aaPredicted RBP9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ANLNQ9NQW6 1124 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 ITGB1BP2Q9UKP3 347 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 CDH7Q9ULB5 785 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 RAD54BQ9Y620 910 aa9.01□□□□□ -0.97
GPNMB-202ENST00000381990 TET1Q8NFU7 2136 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TTC3P53804 2025 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 A0A087WXM4 84 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TRIM64CA6NLI5 447 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 OR4Q2P0C623 313 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ERVK-10P10266 1014 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 EPHA3P29320 983 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 GLUD2P49448 558 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 CRADDP78560 199 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 CBX3Q13185 183 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 MAPRE2Q15555 327 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ZYG11AQ6WRX3 759 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 STRA8Q7Z7C7 330 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TNIP2Q8NFZ5 429 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ZNF420Q8TAQ5 688 aaPredicted RBP9□□□□□ -0.97
GPNMB-202ENST00000381990 SGF29Q96ES7 293 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 HSPBAP1Q96EW2 488 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TSNARE1Q96NA8 513 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 RANBP9Q96S59 729 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TMEM79Q9BSE2 394 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 WDR55Q9H6Y2 383 aaPredicted RBP9□□□□□ -0.97
GPNMB-202ENST00000381990 ABCC13Q9NSE7 274 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 OLAHQ9NV23 265 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ZNF358Q9NW07 568 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 SYBUQ9NX95 663 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 PACSIN3Q9UKS6 424 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 WDR37Q9Y2I8 494 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 MYOCOSA0A1B0GUC4 107 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 C7orf72A4D263 438 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TRPC5OSA6NMA1 111 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 HOXA2O43364 376 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 IGLV3-25P01717 112 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ERCC2P18074 760 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 SLC7A1P30825 629 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 CYP2C18P33260 490 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 DPP6P42658 865 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 PHEXP78562 749 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 NSUN2Q08J23 767 aaKnown RBP eCLIP9□□□□□ -0.97
GPNMB-202ENST00000381990 STX5Q13190 355 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 NRF1Q16656 503 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ZBED5Q49AG3 693 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 VARS2Q5ST30 1063 aaKnown RBP9□□□□□ -0.97
GPNMB-202ENST00000381990 IL23RQ5VWK5 629 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 ISLR2Q6UXK2 745 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 GPR141Q7Z602 305 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 TMEM135Q86UB9 458 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 SCN4BQ8IWT1 228 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 PLD6Q8N2A8 252 aaKnown RBP9□□□□□ -0.97
GPNMB-202ENST00000381990 PACRGLQ8N7B6 248 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 SERBP1Q8NC51 408 aaKnown RBP eCLIP9□□□□□ -0.97
GPNMB-202ENST00000381990 USP13Q92995 863 aaPredicted RBP9□□□□□ -0.97
GPNMB-202ENST00000381990 PBXIP1Q96AQ6 731 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 CASD1Q96PB1 797 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 DEFB118Q96PH6 123 aa9□□□□□ -0.97
GPNMB-202ENST00000381990 LGMNQ99538 433 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms