RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RGSL1A5PLK6 1076 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SAC3D1A6NKF1 404 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 H3BNH8 94 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TREHO43280 583 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TSPAN3O60637 253 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 RNASEH2AO75792 299 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 NPR3P17342 541 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SMPD1P17405 629 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 KCNA5P22460 613 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 CES1P23141 567 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TAS2R39P59534 338 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TSPY1Q01534 308 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TRIM16LQ309B1 348 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 MTX3Q5HYI7 312 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 AARS2Q5JTZ9 985 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SNX29P2Q8IUI4 249 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 GABPB2Q8TAK5 448 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ACMSDQ8TDX5 336 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 CHPT1Q8WUD6 406 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TNFRSF12AQ9NP84 129 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 DSEQ9UL01 958 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ACOT9Q9Y305 439 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 COPG1Q9Y678 874 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF646O15015 1829 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 OR51F1A6NGY5 319 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SOBPA7XYQ1 873 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 CLIC3O95833 236 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 NOS2P35228 1153 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 MAGEA6P43360 314 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ARPC4P59998 168 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 ESRRGP62508 458 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 PTPRCAPQ14761 206 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SPANXN3Q5MJ09 141 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 CNSTQ6PJW8 725 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 TMEM26Q6ZUK4 368 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 FAM47BQ8NA70 645 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 GAD1Q99259 594 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 SERPINI1Q99574 410 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 HERC2P3Q9BVR0 1158 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 OSBPL10Q9BXB5 764 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 FSD1LQ9BXM9 530 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 NDFIP2Q9NV92 336 aa12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-202ENST00000380281 FAM95CA0A1B0GW59 222 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 GRID2O43424 1007 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 AP2A1O95782 977 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 S100BP04271 92 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF182P17025 639 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 BDNFP23560 247 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC26A2P50443 739 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 CCNA1P78396 465 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 STEAP4Q687X5 459 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 TAPT1Q6NXT6 567 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF786Q8N393 782 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 CNTD1Q8N815 330 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 TNIP3Q96KP6 325 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 B3GALT6Q96L58 329 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 TRPV5Q9NQA5 729 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 OXSMQ9NWU1 459 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 GID8Q9NWU2 228 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 PADI4Q9UM07 663 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 RLFQ13129 1914 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF839A8K0R7 811 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 H3BMQ9 156 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 TIPRLO75663 272 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 SLC25A27O95847 323 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 FYNP06241 537 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 ZNF26P17031 533 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 ME2P23368 584 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 GSSP48637 474 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 TRAF2Q12933 501 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 SCIMPQ6UWF3 145 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 TANKQ92844 425 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 ITPKCQ96DU7 683 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 COG8Q96MW5 612 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 KLHL5Q96PQ7 755 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 DUSP16Q9BY84 665 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 RPF2Q9H7B2 306 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 NOL11Q9H8H0 719 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 STK39Q9UEW8 545 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 SSC5DA1L4H1 1573 aa12.54□□□□□ -0.4
PRPF40B-202ENST00000380281 GOLGA4Q13439 2230 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 E7ENX8 843 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PPP6CO00743 305 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SULT1C4O75897 302 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 SUPT7LO94864 414 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PGK1P00558 417 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PHKG1Q16816 387 aa12.53□□□□□ -0.4
PRPF40B-202ENST00000380281 PAQR9Q6ZVX9 377 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms