RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PPP1R2P1Q96PQ5 205 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CMKLR1Q99788 373 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 HERC2P3Q9BVR0 1158 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 DUSP16Q9BY84 665 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CDC42EP4Q9H3Q1 356 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 LRRC4CQ9HCJ2 640 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 BPIFA1Q9NP55 256 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 PRKAG3Q9UGI9 489 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 GGA2Q9UJY4 613 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SLC6A14Q9UN76 642 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 GTPBP10A4D1E9 387 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 KCNK1O00180 336 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CASKO14936 926 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 KLK10O43240 276 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 MBTPS2O43462 519 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 HS6ST1O60243 411 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 AGTP01019 485 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 THEGLP0DJG4 465 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ACP5P13686 325 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CYP3A5P20815 502 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 STIP1P31948 543 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 RPS24P62847 133 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ATP13A4Q4VNC1 1196 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 WLSQ5T9L3 541 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 IZUMO3Q5VZ72 239 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 Q6ZVU0 165 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SPATA24Q86W54 205 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CIR1Q86X95 450 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 C1orf210Q8IVY1 113 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 DTWD2Q8NBA8 298 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 NETO2Q8NC67 525 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CEP76Q8TAP6 659 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 TMEM125Q96AQ2 219 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 OTUB2Q96DC9 234 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ZNF570Q96NI8 536 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 HSD17B14Q9BPX1 270 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 VCX3BQ9H321 246 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 MINDY3Q9H8M7 445 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 VCX3AQ9NNX9 186 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 VPS9D1Q9Y2B5 631 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 DERAQ9Y315 318 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 A0A0G2JND7 137 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 OR10H2O60403 315 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ZNF189O75820 626 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 DLDP09622 509 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 RBP3P10745 1247 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 PCNAP12004 261 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CPA2P48052 419 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 GALK1P51570 392 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 COPS2P61201 443 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ARHGAP8P85298 464 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ZNF252P-AS1Q0IIN9 211 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 MAP7Q14244 749 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 GRM3Q14832 879 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 PPP1R15BQ5SWA1 713 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 DCAF12L1Q5VU92 463 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 LYPLAL1Q5VWZ2 237 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 EPM2AIP1Q7L775 607 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SPATA21Q7Z572 469 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 MYO1HQ8N1T3 1032 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 C2orf73Q8N5S3 287 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 TMEM156Q8N614 296 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SIDT2Q8NBJ9 832 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 OR7D4Q8NG98 312 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 MAGEC3Q8TD91 643 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SHC3Q92529 594 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SEMA3CQ99985 751 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CLSTN3Q9BQT9 956 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 RC3H2Q9HBD1 1191 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 SPHK2Q9NRA0 654 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.59□□□□□ -1.355e-7■■■□□ 17.8
NEDD9-202ENST00000379446 WRAP73Q9P2S5 460 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CD84Q9UIB8 345 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 RABGEF1Q9UJ41 708 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 ITGB1BP2Q9UKP3 347 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 CRYL1Q9Y2S2 319 aa6.59□□□□□ -1.35
NEDD9-202ENST00000379446 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
NEDD9-202ENST00000379446 PLCH1Q4KWH8 1693 aa6.59□□□□□ -1.36
NEDD9-202ENST00000379446 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 O00370 1275 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 WFS1O76024 890 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 CATP04040 527 aaKnown RBP6.58□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF7P17097 686 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-202ENST00000379446 JAM2P57087 298 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 RAB33AQ14088 237 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 CLEC16AQ2KHT3 1053 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 TBC1D25Q3MII6 688 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 MMEL1Q495T6 779 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 DUPD1Q68J44 220 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 GPR149Q86SP6 731 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 C4orf33Q8N1A6 199 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 TFB1MQ8WVM0 346 aaKnown RBP6.58□□□□□ -1.36
NEDD9-202ENST00000379446 NDRG1Q92597 394 aaKnown RBP6.58□□□□□ -1.36
NEDD9-202ENST00000379446 PCDHB18PQ96TA0 734 aa6.58□□□□□ -1.36
NEDD9-202ENST00000379446 ACSS2Q9NR19 701 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms