RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 HECTD3Q5T447 861 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 IL31Q6EBC2 164 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 STYXQ8WUJ0 223 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 HDAC10Q969S8 669 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 WBP2Q969T9 261 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 SGF29Q96ES7 293 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 OLFM1Q99784 485 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 SHCBP1LQ9BZQ2 653 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 RNF38Q9H0F5 515 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 COG4Q9H9E3 785 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 CYP4F11Q9HBI6 524 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 MAN1C1Q9NR34 630 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 OGDHLQ9ULD0 1010 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 MROH6A6NGR9 719 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 TARM1B6A8C7 271 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 PEX11AO75192 247 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 E2F6O75461 281 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 IRF1P10914 325 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 ALOX15P16050 662 aaPredicted RBP14.95□□□□□ -0.02
PRNP-201ENST00000379440 HOXD9P28356 352 aaPredicted RBP14.95□□□□□ -0.02
PRNP-201ENST00000379440 NAGLUP54802 743 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 GNA12Q03113 381 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 SPOUT1Q5T280 376 aaKnown RBP14.95□□□□□ -0.02
PRNP-201ENST00000379440 RNF168Q8IYW5 571 aaPredicted RBP14.95□□□□□ -0.02
PRNP-201ENST00000379440 RBM15BQ8NDT2 890 aaKnown RBP14.95□□□□□ -0.02
PRNP-201ENST00000379440 MAPK15Q8TD08 544 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 MCUR1Q96AQ8 359 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 PRICKLE1Q96MT3 831 aaPredicted RBP14.95□□□□□ -0.02
PRNP-201ENST00000379440 CDH19Q9H159 772 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 DNAJC28Q9NX36 388 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 TAGLN3Q9UI15 199 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 BACE2Q9Y5Z0 518 aa14.95□□□□□ -0.02
PRNP-201ENST00000379440 TMEM114B3SHH9 223 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 H3BNC9 293 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 SCAMP3O14828 347 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 LDB2O43679 373 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 DLX3O60479 287 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 TSPAN3O60637 253 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 KLHL2O95198 593 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 ANP32DO95626 131 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 APOA4P06727 396 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 MPSTP25325 297 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 SLC11A2P49281 568 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 C5orf22Q49AR2 442 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 LIPMQ5VYY2 423 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 TDRD5Q8NAT2 981 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 BLOC1S5Q8TDH9 187 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 HEXDCQ8WVB3 486 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 SREK1Q8WXA9 508 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 VWCEQ96DN2 955 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 IFT43Q96FT9 208 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 NSMCE3Q96MG7 304 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 MARCH4Q9P2E8 410 aaPredicted RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 ARL5AQ9Y689 179 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 C2orf78A6NCI8 922 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 WFS1O76024 890 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 COL6A2P12110 1019 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 CCL5P13501 91 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 CRABP2P29373 138 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 RGRP47804 291 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 LEPRP48357 1165 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 SLC12A2P55011 1212 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 PLD1Q13393 1074 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 SLC9B1Q4ZJI4 515 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 ANKRD33Q7Z3H0 272 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 ZNF461Q8TAF7 563 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 EXOC2Q96KP1 924 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 PPP1R36Q96LQ0 422 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 TBATAQ96M53 351 aa14.94□□□□□ -0.02
PRNP-201ENST00000379440 CDK5RAP1Q96SZ6 601 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 STN1Q9H668 368 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 UTP6Q9NYH9 597 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 AFF4Q9UHB7 1163 aaKnown RBP14.94□□□□□ -0.02
PRNP-201ENST00000379440 STC2O76061 302 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 NCF2P19878 526 aaPredicted RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 CORO1AP31146 461 aaKnown RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 POLD2P49005 469 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 PRAMEP78395 509 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 POU4F1Q01851 419 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 TMED1Q13445 227 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 IKBKEQ14164 716 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 CSHL1Q14406 222 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 ARL13AQ5H913 290 aaPredicted RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 C16orf59Q7L2K0 433 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 CILP2Q8IUL8 1156 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 POU5F2Q8N7G0 328 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 RDH11Q8TC12 318 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 MID2Q9UJV3 735 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 MTF2Q9Y483 593 aaPredicted RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 SPECC1L-ADORA2AF8WAN1 911 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 H0Y3Z8 333 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 ABLIM3O94929 683 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 LUC7L3O95232 432 aaKnown RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 PAPSS2O95340 614 aaPredicted RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 ATP5BP06576 529 aaKnown RBP14.93□□□□□ -0.02
PRNP-201ENST00000379440 MYBPC3Q14896 1274 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 CFAP157Q5JU67 520 aa14.93□□□□□ -0.02
PRNP-201ENST00000379440 WASHC2DQ5SRD0 308 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms