RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 KAT7O95251 611 aa8.78□□□□□ -1
LIG3-202ENST00000378526 TGDSO95455 350 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ASLP04424 464 aa8.78□□□□□ -1
LIG3-202ENST00000378526 CYP2A7P20853 494 aa8.78□□□□□ -1
LIG3-202ENST00000378526 GMPSP49915 693 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 FADDQ13158 208 aa8.78□□□□□ -1
LIG3-202ENST00000378526 RNF151Q2KHN1 245 aa8.78□□□□□ -1
LIG3-202ENST00000378526 AGMOQ6ZNB7 445 aa8.78□□□□□ -1
LIG3-202ENST00000378526 CBWD2Q8IUF1 395 aa8.78□□□□□ -1
LIG3-202ENST00000378526 KAT5Q92993 513 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PAGR1Q9BTK6 254 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ADGRE3Q9BY15 652 aa8.78□□□□□ -1
LIG3-202ENST00000378526 TPK1Q9H3S4 243 aa8.78□□□□□ -1
LIG3-202ENST00000378526 DMGDHQ9UI17 866 aaKnown RBP8.78□□□□□ -1
LIG3-202ENST00000378526 ICKQ9UPZ9 632 aa8.78□□□□□ -1
LIG3-202ENST00000378526 NEDD8-MDP1E9PL57 170 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SERPINB7O75635 380 aa8.78□□□□□ -1
LIG3-202ENST00000378526 DNAJB2P25686 324 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PON1P27169 355 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ST8SIA6P61647 398 aa8.78□□□□□ -1
LIG3-202ENST00000378526 NOMO3P69849 1222 aa8.78□□□□□ -1
LIG3-202ENST00000378526 TLE3Q04726 772 aa8.78□□□□□ -1
LIG3-202ENST00000378526 NOMO1Q15155 1222 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SPESP1Q6UW49 350 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PREBQ9HCU5 417 aa8.78□□□□□ -1
LIG3-202ENST00000378526 TBC1D22BQ9NU19 505 aa8.78□□□□□ -1
LIG3-202ENST00000378526 STK32BQ9NY57 414 aa8.78□□□□□ -1
LIG3-202ENST00000378526 COG5Q9UP83 839 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ENTPD4Q9Y227 616 aa8.78□□□□□ -1
LIG3-202ENST00000378526 TEX51A0A1B0GUA7 166 aa8.78□□□□□ -1
LIG3-202ENST00000378526 H7C1Q1 480 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PITPNM1O00562 1244 aa8.78□□□□□ -1
LIG3-202ENST00000378526 C2CD2LO14523 706 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ADH6P28332 368 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ALDH4A1P30038 563 aa8.78□□□□□ -1
LIG3-202ENST00000378526 MYL6P60660 151 aa8.78□□□□□ -1
LIG3-202ENST00000378526 VLDLRP98155 873 aa8.78□□□□□ -1
LIG3-202ENST00000378526 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 FBXO39Q8N4B4 442 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ZNF248Q8NDW4 579 aa8.78□□□□□ -1
LIG3-202ENST00000378526 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
LIG3-202ENST00000378526 UFD1Q92890 307 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.78□□□□□ -1
LIG3-202ENST00000378526 CYP26A1O43174 497 aa8.78□□□□□ -1
LIG3-202ENST00000378526 GLP2RO95838 553 aa8.78□□□□□ -1
LIG3-202ENST00000378526 MAGP20916 626 aa8.78□□□□□ -1
LIG3-202ENST00000378526 SPIBQ01892 262 aa8.78□□□□□ -1
LIG3-202ENST00000378526 MOGQ16653 247 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PDK4Q16654 411 aa8.78□□□□□ -1
LIG3-202ENST00000378526 AARDQ4LEZ3 155 aa8.78□□□□□ -1
LIG3-202ENST00000378526 RC3H1Q5TC82 1133 aaKnown RBP8.78□□□□□ -1
LIG3-202ENST00000378526 USPL1Q5W0Q7 1092 aa8.78□□□□□ -1
LIG3-202ENST00000378526 FAM122CQ6P4D5 195 aa8.78□□□□□ -1
LIG3-202ENST00000378526 KANSL1Q7Z3B3 1105 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ADGRD2Q7Z7M1 963 aa8.78□□□□□ -1
LIG3-202ENST00000378526 PAQR7Q86WK9 346 aa8.78□□□□□ -1
LIG3-202ENST00000378526 OR51D1Q8NGF3 324 aa8.78□□□□□ -1
LIG3-202ENST00000378526 ZNF420Q8TAQ5 688 aaPredicted RBP8.78□□□□□ -1
LIG3-202ENST00000378526 TAAR8Q969N4 342 aa8.78□□□□□ -1
LIG3-202ENST00000378526 M0R129 80 aa8.77□□□□□ -1
LIG3-202ENST00000378526 TULP3O75386 442 aa8.77□□□□□ -1
LIG3-202ENST00000378526 AHSA1O95433 338 aa8.77□□□□□ -1
LIG3-202ENST00000378526 CCNG2Q16589 344 aa8.77□□□□□ -1
LIG3-202ENST00000378526 LAPTM4BQ86VI4 370 aa8.77□□□□□ -1
LIG3-202ENST00000378526 ZNF709Q8N972 641 aa8.77□□□□□ -1
LIG3-202ENST00000378526 FBXO30Q8TB52 745 aa8.77□□□□□ -1
LIG3-202ENST00000378526 STRBPQ96SI9 672 aaKnown RBP8.77□□□□□ -1
LIG3-202ENST00000378526 PUS3Q9BZE2 481 aaKnown RBP8.77□□□□□ -1
LIG3-202ENST00000378526 ACTR6Q9GZN1 396 aa8.77□□□□□ -1
LIG3-202ENST00000378526 MUC3BQ9H195 1237 aa8.77□□□□□ -1
LIG3-202ENST00000378526 NELFAQ9H3P2 528 aa8.77□□□□□ -1
LIG3-202ENST00000378526 C1orf109Q9NX04 203 aa8.77□□□□□ -1
LIG3-202ENST00000378526 A0A087X0B3 334 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 BORCS7-ASMTA0A0B4J1R7 106 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 NDUFS2O75306 463 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 VNN2O95498 520 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 MLYCDO95822 493 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ZNF81P51508 661 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 TSPAN5P62079 268 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 TRIM40Q6P9F5 258 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PDZD9Q8IXQ8 264 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 SLC44A3Q8N4M1 653 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ESX1Q8N693 406 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 C9orf43Q8TAL5 461 aaPredicted RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 TESCQ96BS2 214 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 KCTD5Q9NXV2 234 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 RNASEH1O60930 286 aaKnown RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 GLDCP23378 1020 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PKNOX1P55347 436 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 KRBOX4Q5JUW0 171 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 C11orf63Q6NUN7 778 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 KLHDC10Q6PID8 442 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 ERGIC2Q96RQ1 377 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 SLCO1B3Q9NPD5 702 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 TMLHEQ9NVH6 421 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 PPP4R1LQ9P1A2 415 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 RCOR3Q9P2K3 495 aaPredicted RBP8.77□□□□□ -1.01
LIG3-202ENST00000378526 PACSIN3Q9UKS6 424 aa8.77□□□□□ -1.01
LIG3-202ENST00000378526 FXYD6-FXYD2A0A087WZ82 144 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms