RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 POLIQ9UNA4 740 aa11.84□□□□□ -0.51
NPHP4-202ENST00000378161 CYP3A7-CYP3A51PA0A087WV96 503 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 AOC1P19801 751 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 CYP3A7P24462 503 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 NUP62P37198 522 aaPredicted RBP11.83□□□□□ -0.51
NPHP4-202ENST00000378161 MERTKQ12866 999 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 KIF19Q2TAC6 998 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF667Q5HYK9 610 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF512Q96ME7 567 aaPredicted RBP11.83□□□□□ -0.51
NPHP4-202ENST00000378161 LRRC19Q9H756 370 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 BRD9Q9H8M2 597 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 DCDC2Q9UHG0 476 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 ADGRE2Q9UHX3 823 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 GLS2Q9UI32 602 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 PLA2G4CQ9UP65 541 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 TPRKBQ9Y3C4 175 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 MYH13Q9UKX3 1938 aa11.83□□□□□ -0.51
NPHP4-202ENST00000378161 TIPRLO75663 272 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SSTR1P30872 391 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 HTR7P34969 479 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SERPINB9P50453 376 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CTAG1AP78358 180 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SCARA5Q6ZMJ2 495 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 COMMD7Q86VX2 200 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SNX29P2Q8IUI4 249 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 KBTBD8Q8NFY9 601 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ETNPPLQ8TBG4 499 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SLC5A5Q92911 643 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 RIT1Q92963 219 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 DPEP3Q9H4B8 488 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CSADQ9Y600 493 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 TOR1AO14656 332 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 NDST3O95803 873 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CCNYL3P0C7X3 344 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 FOSL2P15408 326 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 DCKP27707 260 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ACOT2P49753 483 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 MGAT5BQ3V5L5 792 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ATP13A5Q4VNC0 1218 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 FASTKD1Q53R41 847 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 METTL23Q86XA0 190 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ATAD1Q8NBU5 361 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 FBXO36Q8NEA4 188 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 TRPV3Q8NET8 790 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 TEKT5Q96M29 485 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 C12orf65Q9H3J6 166 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 COPZ2Q9P299 210 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 MKLN1Q9UL63 735 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 NFAT5O94916 1531 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ANKRD63C9JTQ0 380 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SERPINE1P05121 402 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 DLDP09622 509 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 RPL10AP62906 217 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CCDC142Q17RM4 750 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CCDC157Q569K6 752 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ALG3Q92685 438 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 SLC6A17Q9H1V8 727 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 EPB41L4BQ9H329 900 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 ASNSD1Q9NWL6 643 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 HPF1Q9NWY4 346 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 RBAKQ9NYW8 714 aaPredicted RBP11.83□□□□□ -0.52
NPHP4-202ENST00000378161 TBC1D30Q9Y2I9 924 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 CORINQ9Y5Q5 1042 aa11.83□□□□□ -0.52
NPHP4-202ENST00000378161 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CKMT2P17540 419 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ARL4AP40617 200 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 SLC15A1P46059 708 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 YAP1P46937 504 aaKnown RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ERVFC1P60507 584 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 GRM1Q13255 1194 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 MTM1Q13496 603 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 AKIRIN2Q53H80 203 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 SAMD4BQ5PRF9 694 aaKnown RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CIAPIN1Q6FI81 312 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ACAD10Q6JQN1 1059 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 BHLHB9Q6PI77 547 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 KBTBD6Q86V97 674 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 SLC26A11Q86WA9 606 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 PLCZ1Q86YW0 608 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 C3orf58Q8NDZ4 430 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 OR10Z1Q8NGY1 313 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 TRIM43Q96BQ3 446 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 BDH2Q9BUT1 245 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 MIR1-1HGQ9H1L0 117 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 PNPLA8Q9NP80 782 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 NGRNQ9NPE2 291 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms