RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 DGCR6LQ9BY27 220 aa15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 DNAI2Q9GZS0 605 aa15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 TRIT1Q9H3H1 467 aaKnown RBP15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 RAVER2Q9HCJ3 691 aaKnown RBP15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 LTB4R2Q9NPC1 389 aa15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 GTSE1Q9NYZ3 720 aa15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 XPR1Q9UBH6 696 aa15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 WARS2Q9UGM6 360 aaKnown RBP15.77■□□□□ 0.11
CSNK1A1-202ENST00000377843 TCP10L2B9ZVM9 353 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 H0YCG3 227 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 RGS7P49802 495 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLC13A2Q13183 592 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 PRPSAP1Q14558 356 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 CTF1Q16619 201 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 DUOXA2Q1HG44 320 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 PYCR3Q53H96 274 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 TMTC4Q5T4D3 741 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 NCBP2-AS2Q69YL0 99 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 PMF1Q6P1K2 205 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 FUNDC1Q8IVP5 155 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 SPARTQ8N0X7 666 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 ELMOD1Q8N336 334 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 PDZD8Q8NEN9 1154 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 PNPT1Q8TCS8 783 aaKnown RBP15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 TP53INP1Q96A56 240 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 YTHDF1Q9BYJ9 559 aaKnown RBP15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 FBRSL1Q9HCM7 1045 aaKnown RBP15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 PMF1-BGLAPU3KQ54 211 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 BPTFQ12830 3046 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 NEMP2A6NFY4 417 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 RNF103O00237 685 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 UBDO15205 165 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 ABCB7O75027 752 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 DDHD2O94830 711 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 MTHFD1P11586 935 aaKnown RBP15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 IL7RP16871 459 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 CD68P34810 354 aaPredicted RBP15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 SOX11P35716 441 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 GEN1Q17RS7 908 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLCO6A1Q86UG4 719 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLC22A17Q8WUG5 538 aa15.76■□□□□ 0.11
CSNK1A1-202ENST00000377843 AQP12BA6NM10 295 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 RGS13O14921 159 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 NUAK1O60285 661 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 HOXC6P09630 235 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLC35E2BP0CK96 405 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 IL10P22301 178 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 YWHAQP27348 245 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 ATP6V0D1P61421 351 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 FPGSQ05932 587 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 CAPRIN1Q14444 709 aaKnown RBP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 KIAA0408Q6ZU52 694 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 R3HCC1LQ7Z5L2 792 aaKnown RBP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 TFAP2DQ7Z6R9 452 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 AQP12AQ8IXF9 295 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 TTC30BQ8N4P2 665 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 TXNDC5Q8NBS9 432 aaKnown RBP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 CXorf38Q8TB03 319 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 RDH11Q8TC12 318 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 KHSRPQ92945 711 aaKnown RBP eCLIP15.75■□□□□ 0.118e-8■■□□□ 14.2
CSNK1A1-202ENST00000377843 PDCD2LQ9BRP1 358 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 NOL6Q9H6R4 1146 aaKnown RBP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 GGA3Q9NZ52 723 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 MAP10Q9P2G4 905 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 SCN4AP35499 1836 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 TRPC5OSA6NMA1 111 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 C9JVG2 144 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 C7P10643 843 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 CHRNB1P11230 501 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 CXCR2P25025 360 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 PSMA4P25789 261 aaKnown RBP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 PTGER2P43116 358 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 MAPRE2Q15555 327 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 PAGE2BQ5JRK9 111 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 TRPV3Q8NET8 790 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 HDAC11Q96DB2 347 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 CSPG4P5Q96PW8 444 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 NAT9Q9BTE0 207 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 IARS2Q9NSE4 1012 aaKnown RBP15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 SEPT10Q9P0V9 454 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 SLCO3A1Q9UIG8 710 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 ENPP5Q9UJA9 477 aa15.75■□□□□ 0.11
CSNK1A1-202ENST00000377843 TTC24A2A3L6 582 aaPredicted RBP15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 UGT2B11O75310 529 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 KRT75O95678 551 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 CHRM3P20309 590 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 CRHBPP24387 322 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 RFC2P35250 354 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 INPP5AQ14642 412 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 CBX2Q14781 532 aaPredicted RBP15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 LINC00523Q86TU6 105 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 AKAP14Q86UN6 197 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 PYROXD2Q8N2H3 581 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 SMG8Q8ND04 991 aaKnown RBP15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 NDNFQ8TB73 568 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 HTRA1Q92743 480 aa15.74■□□□□ 0.11
CSNK1A1-202ENST00000377843 VMP1Q96GC9 406 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms