RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GARSP41250 739 aaKnown RBP16.94■□□□□ 0.3
HMGN4-201ENST00000377575 THOP1P52888 689 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 PFN3P60673 137 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 YPEL5P62699 121 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 GALNT2Q10471 571 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 FZD2Q14332 565 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 LRRC14Q15048 493 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 CCDC157Q569K6 752 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 ZSWIM9Q86XI8 627 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 GALNT15Q8N3T1 639 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 TP53I13Q8NBR0 393 aaPredicted RBP16.94■□□□□ 0.3
HMGN4-201ENST00000377575 PCDH19Q8TAB3 1148 aa16.94■□□□□ 0.3
HMGN4-201ENST00000377575 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
HMGN4-201ENST00000377575 CFAP69A5D8W1 941 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 NEMP2A6NFY4 417 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 C1QTNF9BB2RNN3 333 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 TRAFD1O14545 582 aaPredicted RBP16.93■□□□□ 0.3
HMGN4-201ENST00000377575 LZTS3O60299 673 aaPredicted RBP16.93■□□□□ 0.3
HMGN4-201ENST00000377575 RFPL3O75679 317 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 CSF2P04141 144 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 C1SP09871 688 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 ELFN1P0C7U0 828 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 C1QTNF9P0C862 333 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 CR2P20023 1033 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 MX2P20592 715 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 LIG3P49916 1009 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 ZNF211Q13398 564 aaPredicted RBP16.93■□□□□ 0.3
HMGN4-201ENST00000377575 AGERQ15109 404 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 IRF4Q15306 451 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 IFI16Q16666 785 aaKnown RBP16.93■□□□□ 0.3
HMGN4-201ENST00000377575 VSIG1Q86XK7 387 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 PGBD5Q8N414 524 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 OR4C6Q8NH72 309 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 SPOCK2Q92563 424 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 TMEM121BQ9BXQ6 578 aaPredicted RBP16.93■□□□□ 0.3
HMGN4-201ENST00000377575 COQ6Q9Y2Z9 468 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 LRP4O75096 1905 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 WDFY3Q8IZQ1 3526 aa16.93■□□□□ 0.3
HMGN4-201ENST00000377575 LRRD1A4D1F6 860 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 ZNF487B1APH4 448 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 FFAR2O15552 330 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 HTRA2O43464 458 aaPredicted RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 NEBLO76041 1014 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 CPP00450 1065 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 PRKCGP05129 697 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 CKMT2P17540 419 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 KDELR1P24390 212 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 SLC1A1P43005 524 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 ACADVLP49748 655 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 MAXP61244 160 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 DNAJC3Q13217 504 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 TCEAL1Q15170 157 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 ODF2Q5BJF6 829 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 MACC1Q6ZN28 852 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 DPPA4Q7L190 304 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 TMPRSS7Q7RTY8 843 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 SLC25A45Q8N413 288 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 ZNF548Q8NEK5 533 aaPredicted RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 PDCD6IPQ8WUM4 868 aaKnown RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 BTN2A2Q8WVV5 523 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 FATE1Q969F0 183 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 MRFAP1L1Q96HT8 127 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 DUSP23Q9BVJ7 150 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 POLR1EQ9GZS1 481 aaKnown RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 NOD2Q9HC29 1040 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 NT5MQ9NPB1 228 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 LUC7LQ9NQ29 371 aaKnown RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 MBNL1Q9NR56 388 aaKnown RBP16.92■□□□□ 0.3
HMGN4-201ENST00000377575 EVA1BQ9NVM1 165 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 UCKL1Q9NWZ5 548 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 NLGN3Q9NZ94 848 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 USP24Q9UPU5 2620 aa16.92■□□□□ 0.3
HMGN4-201ENST00000377575 SIGLEC6O43699 453 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 JUNDP17535 347 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 CCNCP24863 283 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 ZNF75DP51815 510 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 RALGDSQ12967 914 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 ILKQ13418 452 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
HMGN4-201ENST00000377575 PROX2Q3B8N5 592 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 ZNF542PQ5EBM4 170 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 LRRC38Q5VT99 294 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 DHRS13Q6UX07 377 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 CCNI2Q6ZMN8 369 aaPredicted RBP16.91■□□□□ 0.3
HMGN4-201ENST00000377575 CCDC170Q8IYT3 715 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 PQLC3Q8N755 202 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 MAML1Q92585 1016 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 RNF157Q96PX1 679 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 AMACRQ9UHK6 382 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 PCDHGC4Q9Y5F7 938 aa16.91■□□□□ 0.3
HMGN4-201ENST00000377575 IGF2RP11717 2491 aa16.9■□□□□ 0.3
HMGN4-201ENST00000377575 KMT2BQ9UMN6 2715 aaPredicted RBP16.9■□□□□ 0.3
HMGN4-201ENST00000377575 TTC24A2A3L6 582 aaPredicted RBP16.9■□□□□ 0.3
HMGN4-201ENST00000377575 TRIM38O00635 465 aa16.9■□□□□ 0.3
HMGN4-201ENST00000377575 SCAMP1O15126 338 aa16.9■□□□□ 0.3
HMGN4-201ENST00000377575 MATN3O15232 486 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms