RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CARM1Q86X55 608 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 EGFL6Q8IUX8 553 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 SCAMP5Q8TAC9 235 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 SH3RF2Q8TEC5 729 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 DDI1Q8WTU0 396 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 LPPQ93052 612 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 TMIGD2Q96BF3 282 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 RTP3Q9BQQ7 232 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CNOT6Q9ULM6 557 aaKnown RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 TMCO1Q9UM00 188 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 PTCH2Q9Y6C5 1203 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 TCRBV3S1A0A5B6 114 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PDLIM1O00151 329 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CCL22O00626 93 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PAMP19021 973 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CDH2P19022 906 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PGFP49763 221 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CLCN2P51788 898 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 KPNA2P52292 529 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TMEM259Q4ZIN3 620 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 LDB1Q86U70 411 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TSPAN14Q8NG11 270 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 GSTO2Q9H4Y5 243 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 NOL11Q9H8H0 719 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 MRM3Q9HC36 420 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CDH9Q9ULB4 789 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 DICER1Q9UPY3 1922 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PAGE1O75459 146 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 GPC4O75487 556 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TIPRLO75663 272 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PYGLP06737 847 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 FAM163BP0C2L3 166 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CKMT2P17540 419 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 RANBP1P43487 201 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 KCNC1P48547 511 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 SLC7A2P52569 658 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 GRB14Q14449 540 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 MAPRE2Q15555 327 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PSMD5Q16401 504 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PAN2Q504Q3 1202 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 C3orf30Q96M34 536 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CCT7Q99832 543 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TMEM79Q9BSE2 394 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PREBQ9HCU5 417 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 TMLHEQ9NVH6 421 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 SFMBT1Q9UHJ3 866 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 PADI4Q9UM07 663 aa13.3□□□□□ -0.28
ACTN1-202ENST00000376839 NYNRINQ9P2P1 1898 aaKnown RBP13.3□□□□□ -0.28
ACTN1-202ENST00000376839 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 IGLV3-25P01717 112 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 LTA4HP09960 611 aaKnown RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 SLC7A1P30825 629 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 PSEN2P49810 448 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 WNT3AP56704 352 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 AGAP9Q5VTM2 703 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 OLFML2BQ68BL8 750 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 IL31Q6EBC2 164 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 TMEM207Q6UWW9 146 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 CCDC117Q8IWD4 279 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 LRCH3Q96II8 777 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 FAR2Q96K12 515 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 CAAP1Q9H8G2 361 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 MPP6Q9NZW5 540 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 TMEM181Q9P2C4 612 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 NUDT5Q9UKK9 219 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 TRAF6Q9Y4K3 522 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 IRAK2O43187 625 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 NRP2O60462 931 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 ALDOCP09972 364 aaKnown RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 CDK4P11802 303 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 RPL10P27635 214 aaKnown RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 TRAP1Q12931 704 aaKnown RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 TIGD5Q53EQ6 642 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 C8orf82Q6P1X6 216 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 BORAQ6PGQ7 559 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 FCRL2Q96LA5 508 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 OSBPL11Q9BXB4 747 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 ALG9Q9H6U8 611 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 EML4Q9HC35 981 aaKnown RBP13.29□□□□□ -0.28
ACTN1-202ENST00000376839 CROTQ9UKG9 612 aa13.29□□□□□ -0.28
ACTN1-202ENST00000376839 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
ACTN1-202ENST00000376839 SRP72O76094 671 aaKnown RBP13.28□□□□□ -0.28
ACTN1-202ENST00000376839 ATP6V1B2P21281 511 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms