RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 TM9SF1O15321 606 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 JMJD7P0C870 316 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ADAM8P78325 824 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 GPSM2P81274 684 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 MTM1Q13496 603 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 RAET1GQ6H3X3 334 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 POTEAQ6S8J7 498 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PI16Q6UXB8 463 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 USP17L1Q7RTZ2 530 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TPRA1Q86W33 373 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 CREG2Q8IUH2 290 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 HID1Q8IV36 788 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 LGI2Q8N0V4 545 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 POC5Q8NA72 575 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ARRDC4Q8NCT1 418 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 FAM120BQ96EK7 910 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 NECAB3Q96P71 396 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 FAM173AQ9BQD7 235 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ELAC1Q9H777 363 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 CERS4Q9HA82 394 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SMPD4Q9NXE4 827 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ETAA1Q9NY74 926 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TMEM9Q9P0T7 183 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 MAN1B1Q9UKM7 699 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 KIAA0100Q14667 2235 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF815PA8K554 130 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 E7EQ34 232 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PGRMC2O15173 223 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 RLN2P04090 185 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 NR3C2P08235 984 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 AKR1B1P15121 316 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PDGFRAP16234 1089 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ACAT1P24752 427 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 CCKBRP32239 447 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 IL6STP40189 918 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 GYG1P46976 350 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 FASLGP48023 281 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PLAURQ03405 335 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 FAM83EQ2M2I3 478 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 BICRALQ6AI39 1079 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 C1orf186Q6ZWK4 172 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 EIF3MQ7L2H7 374 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF605Q86T29 641 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 RAB43Q86YS6 212 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 OXR1Q8N573 874 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 FBXO15Q8NCQ5 510 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ARHGEF26Q96DR7 871 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 IL17RAQ96F46 866 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 RIPOR3Q96MK2 946 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TMEM74Q96NL1 305 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 C11orf70Q9BRQ4 267 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ANKZF1Q9H8Y5 726 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PSMC3IPQ9P2W1 217 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 VPS9D1Q9Y2B5 631 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SH3PXD2BA1X283 911 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SLC30A4O14863 429 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TNFSF12O43508 249 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 NCK2O43639 380 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 DGAT1O75907 488 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 IFNA2P01563 188 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SAGP10523 405 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 CPT1AP50416 773 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ARSEP51690 589 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 MAPK10P53779 464 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ERVK-24P63145 666 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 XIAPP98170 497 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TLE1Q04724 770 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 MGAT5Q09328 741 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ITPK1Q13572 414 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PXKQ7Z7A4 578 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 IL22RA1Q8N6P7 574 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SPATA4Q8NEY3 305 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 Q96MT0 163 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SLC38A2Q96QD8 506 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 HNRNPABQ99729 332 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 UCK2Q9BZX2 261 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 OR10A4Q9H209 315 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 MEAF6Q9HAF1 191 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 POLD4Q9HCU8 107 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 STARD7Q9NQZ5 370 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 GPRC5BQ9NZH0 403 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 KCNIP1Q9NZI2 227 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 KLK14Q9P0G3 267 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 DMGDHQ9UI17 866 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PCTPQ9UKL6 214 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 DNAJC16Q9Y2G8 782 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PRXQ9BXM0 1461 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 A0A0D9SFI3 127 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PHGDHO43175 533 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF207O43670 478 aaKnown RBP4.66□□□□□ -1.66
SCN1A-202ENST00000375405 RHOCP08134 193 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 FABP6P51161 128 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 PGDP52209 483 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 S100A10P60903 97 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 NCS1P62166 190 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 TLE2Q04725 743 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 SMARCB1Q12824 385 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 NOMO1Q15155 1222 aa4.66□□□□□ -1.66
SCN1A-202ENST00000375405 MED22Q15528 200 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms