RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SFMBT1Q9UHJ3 866 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ZNF638Q14966 1978 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 A0A087WXM4 84 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FAM95CA0A1B0GW59 222 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FAM149AA5PLN7 773 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 DCLK1O15075 740 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TRIM24O15164 1050 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 LRPAP1P30533 357 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 MAGEA8P43361 318 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 RAB10P61026 200 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 DCAF4L1Q3SXM0 396 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ZNF618Q5T7W0 954 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 RNF168Q8IYW5 571 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CBR4Q8N4T8 237 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 HMGCLL1Q8TB92 370 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SPPL2BQ8TCT7 592 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ELMO2Q96JJ3 720 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FTHL17Q9BXU8 183 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PAIP1Q9H074 479 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 GBA3Q9H227 469 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 MRPL46Q9H2W6 279 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FAM124BQ9H5Z6 455 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 IL1RL2Q9HB29 575 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CHST12Q9NRB3 414 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PIGVQ9NUD9 493 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 DUS2Q9NX74 493 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 IPO11Q9UI26 975 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CROTQ9UKG9 612 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 NUP205Q92621 2012 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 TCRBV3S1A0A5B6 114 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 TARM1B6A8C7 271 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 BMP10O95393 424 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 JCHAINP01591 159 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SNRPB2P08579 225 aaKnown RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 UGT1A6P19224 532 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 NDUFV1P49821 464 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 PRKCQQ04759 706 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SFSWAPQ12872 951 aaKnown RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SQLEQ14534 574 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 POU6F1Q14863 301 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 NHSL2Q5HYW2 709 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SAMD4BQ5PRF9 694 aaKnown RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 LHX8Q68G74 356 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 KCTD11Q693B1 232 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 ZNF280DQ6N043 979 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 PIWIL4Q7Z3Z4 852 aaKnown RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 PELI3Q8N2H9 469 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 NPWQ8N729 165 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 TOP1MTQ969P6 601 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 MAELQ96JY0 434 aaKnown RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SNX25Q9H3E2 840 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 STAP1Q9ULZ2 295 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 CITO14578 2027 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 RNF103-CHMP3A0A140T963 221 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 ATP6AP2A0A1C7CYW4 349 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 ATP6AP2O75787 350 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 HSPA8P11142 646 aaKnown RBP11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SCNN1AP37088 669 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 PSMD7P51665 324 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 ACLYP53396 1101 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 SLC12A2P55011 1212 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 TMEM62Q0P6H9 643 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 CDH17Q12864 832 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 CSHL1Q14406 222 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 PRPSAP1Q14558 356 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 C6orf10Q5SRN2 563 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 ZBTB46Q86UZ6 589 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 GPR180Q86V85 440 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 MCMBPQ9BTE3 642 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 OSBPL2Q9H1P3 480 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 NSMCE4AQ9NXX6 385 aa11.16□□□□□ -0.62
CCDC40-203ENST00000374877 ERI2A8K979 691 aaKnown RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CLIC3O95833 236 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CCR3P51677 355 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 CTBSQ01459 385 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TRAP1Q12931 704 aaKnown RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 ZBED5Q49AG3 693 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 GDF6Q6KF10 455 aaPredicted RBP11.15□□□□□ -0.62
CCDC40-203ENST00000374877 ARRDC4Q8NCT1 418 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TRPC4APQ8TEL6 797 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 HEXDCQ8WVB3 486 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TCF12Q99081 682 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 LRRC4Q9HBW1 653 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 TBC1D23Q9NUY8 699 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 SMOXQ9NWM0 555 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 NRP2O60462 931 aa11.15□□□□□ -0.62
CCDC40-203ENST00000374877 NPHS1O60500 1241 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms