RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PGM1P36871 562 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 VIPR2P41587 438 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ABCG1P45844 678 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 CCNG1P51959 295 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ABCE1P61221 599 aaKnown RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 KDSRQ06136 332 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ITGA9Q13797 1035 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 PDPK2PQ6A1A2 396 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ARHGAP12Q8IWW6 846 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ARL14EPQ8N8R7 260 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 SPATA22Q8NHS9 363 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 SREK1Q8WXA9 508 aaKnown RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 N4BP2L2Q92802 583 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 FCRL2Q96LA5 508 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 TBL1YQ9BQ87 522 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 CCDC106Q9BWC9 280 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 NMUR1Q9HB89 426 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 COMMD8Q9NX08 183 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 OSER1Q9NX31 292 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 NSMCE4AQ9NXX6 385 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 SORCS3Q9UPU3 1222 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 SCML2Q9UQR0 700 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 APOBEC2Q9Y235 224 aaKnown RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ZFP37Q9Y6Q3 630 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 OBSL1O75147 1896 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 SHROOM3Q8TF72 1996 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PATJQ8NI35 1801 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 ANAPC1Q9H1A4 1944 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 GOLGA8TH3BQL2 631 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 CACNG3O60359 315 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 GNAZP19086 355 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 UBAP2LQ14157 1087 aaKnown RBP15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PPP2R5DQ14738 602 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 TANGO2Q6ICL3 276 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 MON1AQ86VX9 555 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 RNF135Q8IUD6 432 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 CMTM8Q8IZV2 173 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PLD6Q8N2A8 252 aaKnown RBP15.67■□□□□ 0.1
CCDC40-202ENST00000374876 VPS39Q96JC1 886 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 ASB16Q96NS5 453 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 FCRL5Q96RD9 977 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 SORT1Q99523 831 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 KXD1Q9BQD3 176 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 KIFC1Q9BW19 673 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 RNF38Q9H0F5 515 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 NUDT5Q9UKK9 219 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 NUP205Q92621 2012 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 A0A1W2PQH9 124 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 CCDC78A2IDD5 438 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PRR5-ARHGAP8B1AHC4 643 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 MATN3O15232 486 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 MAFKO60675 156 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
CCDC40-202ENST00000374876 C2P06681 752 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 HDCP19113 662 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 HOXC13P31276 330 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 HADHAP40939 763 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 TUBP50607 506 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 ARHGAP8P85298 464 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 IRF9Q00978 393 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 DLG2Q15700 870 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 KHDC1Q4VXA5 237 aaKnown RBP15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PCID2Q5JVF3 399 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 SCD5Q86SK9 330 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 TTC16Q8NEE8 873 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 IPMKQ8NFU5 416 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PLA2G2FQ9BZM2 168 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 SLC39A8Q9C0K1 460 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 CCSER2Q9H7U1 834 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 GLOD4Q9HC38 313 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 PNPOQ9NVS9 261 aa15.67■□□□□ 0.1
CCDC40-202ENST00000374876 NEBLO76041 1014 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 PRAMEF12O95522 483 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 TBX18O95935 607 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 MOCS2O96007 188 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-202ENST00000374876 ZDHHC11BP0C7U3 371 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 AVPR1AP37288 418 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 PPP3CCP48454 512 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 HARS2P49590 506 aaKnown RBP15.66■□□□□ 0.1
CCDC40-202ENST00000374876 MXRA7P84157 204 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 KPNB1Q14974 876 aaKnown RBP15.66■□□□□ 0.1
CCDC40-202ENST00000374876 ANO4Q32M45 955 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 MANEALQ5VSG8 457 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 RAPH1Q70E73 1250 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 CLEC14AQ86T13 490 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 KLHDC8BQ8IXV7 354 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 RBM15BQ8NDT2 890 aaKnown RBP15.66■□□□□ 0.1
CCDC40-202ENST00000374876 PDZD8Q8NEN9 1154 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 SMARCD2Q92925 531 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 ANKRD27Q96NW4 1050 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 PPP1R2P1Q96PQ5 205 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 IL12RB2Q99665 862 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 NMRAL1Q9HBL8 299 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 TLR8Q9NR97 1041 aaKnown RBP15.66■□□□□ 0.1
CCDC40-202ENST00000374876 TLK1Q9UKI8 766 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 SLC39A10Q9ULF5 831 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 CCL26Q9Y258 94 aa15.66■□□□□ 0.1
CCDC40-202ENST00000374876 MYO16Q9Y6X6 1858 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 ANHXE9PGG2 379 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 MAGEC1O60732 1142 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms