RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 TMEM135Q86UB9 458 aa12.01□□□□□ -0.49
TMEM38B-202ENST00000374692 SLC7A6OSQ96CW6 309 aaPredicted RBP12.01□□□□□ -0.49
TMEM38B-202ENST00000374692 NAT9Q9BTE0 207 aa12.01□□□□□ -0.49
TMEM38B-202ENST00000374692 FKBPLQ9UIM3 349 aa12.01□□□□□ -0.49
TMEM38B-202ENST00000374692 ZNF840PA6NDX5 716 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 OR6C75A6NL08 312 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SYN3O14994 580 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 INPPL1O15357 1258 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 TIMM44O43615 452 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 TRIM13O60858 407 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 MTX2O75431 263 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 RTN3O95197 1032 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 TRIM16O95361 564 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 MYOGP15173 224 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 UGT1A6P19224 532 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 UGT1A1P22309 533 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 UGT1A4P22310 534 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 ARNTP27540 789 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 UGT1A3P35503 534 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 UGT1A5P35504 534 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 NUDT2P50583 147 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 C4orf22Q6V702 233 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SLC39A5Q6ZMH5 540 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 CCDC97Q96F63 343 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 SEMA4BQ9NPR2 832 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 ZDHHC2Q9UIJ5 367 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 AGO1Q9UL18 857 aaKnown RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 V9GYQ6 96 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 A0A1W2PQ67 120 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SUPT3HB4E1H0 165 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 H7C4K7 107 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SMAD6O43541 496 aaKnown RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 KATNA1O75449 491 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SUPT3HO75486 399 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 NDUFS3O75489 264 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 PRAMEF12O95522 483 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SLC35E2BP0CK96 405 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 MLNP12872 115 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 IRF5Q13568 498 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 HSF5Q4G112 596 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 ARCQ7LC44 396 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 GIMAP7Q8NHV1 300 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 KCNA7Q96RP8 456 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 ZNF334Q9HCZ1 680 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 NCKIPSDQ9NZQ3 722 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 CXXC1Q9P0U4 656 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 SH3BP1Q9Y3L3 701 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 WASF2Q9Y6W5 498 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 E5RI56 91 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 TXNDC9O14530 226 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 SRP72O76094 671 aaKnown RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 GLP2RO95838 553 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 LRG1P02750 347 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 CDKN2DP55273 166 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 RAB10P61026 200 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 PPP1R3AQ16821 1122 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 LACTB2Q53H82 288 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 KCTD11Q693B1 232 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 RGS9BPQ6ZS82 235 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 PCDH20Q8N6Y1 951 aaKnown RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 C8orf48Q96LL4 319 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 RAB3IPQ96QF0 476 aaPredicted RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 FCRL5Q96RD9 977 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 TRIM62Q9BVG3 475 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 FBRSL1Q9HCM7 1045 aaKnown RBP12□□□□□ -0.49
TMEM38B-202ENST00000374692 CCDC167Q9P0B6 97 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 ZNF180Q9UJW8 692 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 TIMM22Q9Y584 194 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 REV3LO60673 3130 aa12□□□□□ -0.49
TMEM38B-202ENST00000374692 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 NRG2O14511 850 aaPredicted RBP11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 NIPSNAP2O75323 286 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 GPC4O75487 556 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 DNAJC8O75937 253 aaPredicted RBP11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 STC2O76061 302 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 CXCL14O95715 111 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 CES1P23141 567 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 CSKP41240 450 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 OCRLQ01968 901 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 ARHGEF6Q15052 776 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 PITRM1Q5JRX3 1037 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 CCDC117Q8IWD4 279 aaPredicted RBP11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 APCDD1Q8J025 514 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 BBS5Q8N3I7 341 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 C12orf76Q8N812 135 aaPredicted RBP11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 VAT1Q99536 393 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 CIPCQ9C0C6 399 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 PHACTR1Q9C0D0 580 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 MRPL17Q9NRX2 175 aaKnown RBP11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 UBXN8O00124 270 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 STX7O15400 261 aaKnown RBP11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 DLX3O60479 287 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 PTPRNQ16849 979 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 ICE2Q659A1 982 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 LRRC8EQ6NSJ5 796 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 IFNEQ86WN2 208 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 TRIM42Q8IWZ5 723 aa11.99□□□□□ -0.49
TMEM38B-202ENST00000374692 FUBP3Q96I24 572 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■□ 26.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms