RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 CLCQ05315 142 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 NFIL3Q16649 462 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 PPM1JQ5JR12 505 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 REP15Q6BDI9 236 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 NAPEPLDQ6IQ20 393 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 NEPROQ6NW34 567 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 XKRXQ6PP77 449 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 IKBIPQ70UQ0 350 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 KCNMB4Q86W47 210 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CLEC10AQ8IUN9 316 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 BBS7Q8IWZ6 715 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CCDC120Q96HB5 630 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 ZNF512Q96ME7 567 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 GATA5Q9BWX5 397 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SLC22A4Q9H015 551 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SAV1Q9H4B6 383 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 SERHL2Q9H4I8 314 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SERHLQ9NQF3 203 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TAS2R9Q9NYW1 312 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 H3BMM5 538 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TGFB1I1O43294 461 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SSNA1O43805 119 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 PTPN1P18031 435 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 IL4RP24394 825 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 HLCSP50747 726 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 JAK3P52333 1124 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 GJA9P57773 515 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 PPP2R2BQ00005 443 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 KIZQ2M2Z5 673 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 ZNF181Q2M3W8 571 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 INO80DQ53TQ3 878 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 SPANXN3Q5MJ09 141 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 NPNTQ6UXI9 565 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 AHSA2Q719I0 299 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 RNFT2Q96EX2 444 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 VMP1Q96GC9 406 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 FERD3LQ96RJ6 166 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TBCDQ9BTW9 1192 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TMEM216Q9P0N5 145 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 MKLN1Q9UL63 735 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 VANGL2Q9ULK5 521 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 MAPRE3Q9UPY8 281 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SLC9A8Q9Y2E8 581 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 AQP12BA6NM10 295 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SLC22A2O15244 555 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 C8BP07358 591 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 IL1R1P14778 569 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 F8A1P23610 371 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TYW3Q6IPR3 259 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 NANOGP8Q6NSW7 305 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 KRT74Q7RTS7 529 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 AQP12AQ8IXF9 295 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CADM3Q8N126 398 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CERS2Q96G23 380 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 OMDQ99983 421 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 MED28Q9H204 178 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SARS2Q9NP81 518 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 RASSF1Q9NS23 344 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 NRBP2Q9NSY0 501 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 ADAM28Q9UKQ2 775 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TBX20Q9UMR3 447 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 U3KQV3 271 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 ASTN2O75129 1339 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 CSDE1O75534 798 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 NPM3O75607 178 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 APOL3O95236 402 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 NDUFB10O96000 172 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 ASS1P00966 412 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 FDX1P10109 184 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 LBPP18428 481 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 MTHFRP42898 656 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 SCNN1DP51172 638 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 MTMR1Q13613 665 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 TSNQ15631 228 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 NPY5RQ15761 445 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 SYT16Q17RD7 645 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 INTS11Q5TA45 600 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 TIGD7Q6NT04 549 aaPredicted RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 RIOX2Q8IUF8 465 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 VPS37AQ8NEZ2 397 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 TRNT1Q96Q11 434 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 MID1IP1Q9NPA3 183 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 SIRPGQ9P1W8 387 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 STAP1Q9ULZ2 295 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 CEP170BQ9Y4F5 1589 aaPredicted RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 ERVV-1B6SEH8 477 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 GDF11O95390 407 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 UMPSP11172 480 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 MIPP30301 263 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 PRIM2P49643 509 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 TXNL4AP83876 142 aaKnown RBP10.29□□□□□ -0.76
CD28-202ENST00000374481 MED22Q15528 200 aa10.29□□□□□ -0.76
CD28-202ENST00000374481 PLEKHG6Q3KR16 790 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms