RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 HPS4Q9NQG7 708 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 HEBP1Q9NRV9 189 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 IL1RAPL1Q9NZN1 696 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 LSM7Q9UK45 103 aaKnown RBP14.43□□□□□ -0.1
HMGA1-203ENST00000374116 CHKBQ9Y259 395 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 NCOR1O75376 2440 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TTC28Q96AY4 2481 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 E2F8A0AVK6 867 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 KLF11O14901 512 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 RFPL1O75677 317 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TGDSO95455 350 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 T-ENOLP0DO92 83 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 GRIA1P42261 906 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 NUMBP49757 651 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 SGSHP51688 502 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 MYBPC3Q14896 1274 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 EML3Q32P44 896 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TMEM25Q86YD3 366 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TRIM42Q8IWZ5 723 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TP53INP2Q8IXH6 220 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 PDCD7Q8N8D1 485 aaKnown RBP14.42□□□□□ -0.1
HMGA1-203ENST00000374116 DEPDC1BQ8WUY9 529 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 UCMAQ8WVF2 138 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TTC17Q96AE7 1141 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 E2F7Q96AV8 911 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 ERP27Q96DN0 273 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 NDNQ99608 321 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 TSSK1BQ9BXA7 367 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 BRD8Q9H0E9 1235 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 OSBPL2Q9H1P3 480 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 C12orf65Q9H3J6 166 aaKnown RBP14.42□□□□□ -0.1
HMGA1-203ENST00000374116 THG1LQ9NWX6 298 aaKnown RBP14.42□□□□□ -0.1
HMGA1-203ENST00000374116 ARHGEF38Q9NXL2 777 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 OBP2AQ9NY56 170 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 CIDEBQ9UHD4 219 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 PLLPQ9Y342 182 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 COMMD3-BMI1R4GMX3 469 aa14.42□□□□□ -0.1
HMGA1-203ENST00000374116 KCNU1A8MYU2 1149 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 ARNTLO00327 626 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 CD72P21854 359 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 GSTT1P30711 240 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 CCR1P32246 355 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 SERPINB4P48594 390 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 TPI1P60174 286 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 SFSWAPQ12872 951 aaKnown RBP14.41□□□□□ -0.1
HMGA1-203ENST00000374116 NAB1Q13506 487 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 RCN2Q14257 317 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 LY6G5CQ5SRR4 150 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 PIK3R6Q5UE93 754 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 RAP1GAP2Q684P5 730 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 TRMT10BQ6PF06 316 aaKnown RBP14.41□□□□□ -0.1
HMGA1-203ENST00000374116 TIFABQ6ZNK6 161 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 NAT16Q8N8M0 369 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 OXNAD1Q96HP4 312 aaPredicted RBP14.41□□□□□ -0.1
HMGA1-203ENST00000374116 GBP5Q96PP8 586 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 TRIM55Q9BYV6 548 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 NPHS2Q9NP85 383 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 CA14Q9ULX7 337 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 NEU3Q9UQ49 428 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 MYO18AQ92614 2054 aaKnown RBP14.41□□□□□ -0.1
HMGA1-203ENST00000374116 EIF4E1BA6NMX2 242 aaKnown RBP14.41□□□□□ -0.1
HMGA1-203ENST00000374116 PAGE1O75459 146 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 TCF3P15923 654 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 PGAM1P18669 254 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 RING1Q06587 406 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 MTA1Q13330 715 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 LSAMPQ13449 338 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 ANO4Q32M45 955 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 MARK2Q7KZI7 788 aaKnown RBP14.41□□□□□ -0.1
HMGA1-203ENST00000374116 ZNF567Q8N184 647 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 CFAP52Q8N1V2 620 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 NPWQ8N729 165 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 NETO2Q8NC67 525 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 CDKL2Q92772 493 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 SEPT10Q9P0V9 454 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 OR12D3Q9UGF7 316 aa14.41□□□□□ -0.1
HMGA1-203ENST00000374116 BDP1A6H8Y1 2624 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 TRIM24O15164 1050 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 MTSS1O43312 755 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 ACSL4O60488 711 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 UGT1A9O60656 530 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 LRIG2O94898 1065 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 CYP17A1P05093 508 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 PSMB4P28070 264 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 KPNA1P52294 538 aaPredicted RBP14.4□□□□□ -0.1
HMGA1-203ENST00000374116 SLC34A1Q06495 639 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 PPIDQ08752 370 aaKnown RBP14.4□□□□□ -0.1
HMGA1-203ENST00000374116 RUNX3Q13761 415 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 CASC4Q6P4E1 433 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 NLRP9Q7RTR0 991 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 C14orf80Q86SX3 495 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 CIR1Q86X95 450 aaPredicted RBP14.4□□□□□ -0.1
HMGA1-203ENST00000374116 NXPE3Q969Y0 559 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 PPP1R14BQ96C90 147 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 SPATA16Q9BXB7 569 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 UGT1A7Q9HAW7 530 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 UGT1A10Q9HAW8 530 aa14.4□□□□□ -0.1
HMGA1-203ENST00000374116 UGT1A8Q9HAW9 530 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms