RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MMP12P39900 470 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 LIG3P49916 1009 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 HK3P52790 923 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 PTK2BQ14289 1009 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 LRRC14Q15048 493 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 ENPP7Q6UWV6 458 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 ZNF571Q7Z3V5 609 aaPredicted RBP13.26□□□□□ -0.29
RPF1-201ENST00000370654 RD3Q7Z3Z2 195 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 B3GNT8Q7Z7M8 397 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 SRLQ86TD4 932 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 ZNF248Q8NDW4 579 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 BTN2A2Q8WVV5 523 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 PDXPQ96GD0 296 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 CCDC3Q9BQI4 270 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 APOOQ9BUR5 198 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 SLC13A1Q9BZW2 595 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
RPF1-201ENST00000370654 TMEM63CQ9P1W3 806 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 GULP1Q9UBP9 304 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 PADI4Q9UM07 663 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 ANKRD36A6QL64 1941 aa13.26□□□□□ -0.29
RPF1-201ENST00000370654 DDX3XO00571 662 aaKnown RBP eCLIP13.25□□□□□ -0.29
RPF1-201ENST00000370654 XPAP23025 273 aaPredicted RBP13.25□□□□□ -0.29
RPF1-201ENST00000370654 MIPP30301 263 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 NDST2P52849 883 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 AIF1P55008 147 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 PCBP4P57723 403 aaKnown RBP13.25□□□□□ -0.29
RPF1-201ENST00000370654 TYRO3Q06418 890 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 NFATC4Q14934 902 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 PTPRRQ15256 657 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 FOXR1Q6PIV2 292 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 ANKRD20A12PQ8NF67 263 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 HCAR2Q8TDS4 363 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 OR1E3Q8WZA6 343 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 TBATAQ96M53 351 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 NAP1L5Q96NT1 182 aaPredicted RBP13.25□□□□□ -0.29
RPF1-201ENST00000370654 SLC46A1Q96NT5 459 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 EDEM3Q9BZQ6 932 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 MRPL40Q9NQ50 206 aaKnown RBP13.25□□□□□ -0.29
RPF1-201ENST00000370654 ATP8A1Q9Y2Q0 1164 aa13.25□□□□□ -0.29
RPF1-201ENST00000370654 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 TMEM202A6NGA9 273 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 EIF4E1BA6NMX2 242 aaKnown RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 DFFAO00273 331 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 NTN3O00634 580 aaPredicted RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 KLK10O43240 276 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 PALMO75781 387 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 SKILP12757 684 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 IL1R2P27930 398 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 SRP54P61011 504 aaKnown RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 CCL7P80098 99 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 SKOR1P84550 965 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ELP6Q0PNE2 266 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ANO6Q4KMQ2 910 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ARHGAP40Q5TG30 622 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 RBM44Q6ZP01 1051 aaKnown RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 CCL4L1Q8NHW4 92 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 CCDC74AQ96AQ1 378 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ECHDC3Q96DC8 303 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ZNF641Q96N77 438 aaPredicted RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 LGR4Q9BXB1 951 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 C1QTNF7Q9BXJ2 289 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 SYNDIG1Q9H7V2 258 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 FGF22Q9HCT0 170 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 PARVAQ9NVD7 372 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 ETNK2Q9NVF9 386 aa13.24□□□□□ -0.29
RPF1-201ENST00000370654 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
RPF1-201ENST00000370654 ARHGAP42A6NI28 874 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 CDRT15L2A8MXV6 281 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 AGRPO00253 132 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 LRCH4O75427 683 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
RPF1-201ENST00000370654 PEX11BO96011 259 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 FTLP02792 175 aaPredicted RBP13.23□□□□□ -0.29
RPF1-201ENST00000370654 CSNK1DP48730 415 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 PEX5P50542 639 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 ERVPABLB-1P60509 514 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 SLC10A7Q0GE19 358 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 DPYSQ14117 519 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 AGERQ15109 404 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 CCDC183Q5T5S1 534 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 BRAT1Q6PJG6 821 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 LIPIQ6XZB0 460 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 SDR16C5Q8N3Y7 309 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 PGBD5Q8N414 524 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 ZNF843Q8N446 348 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 ARL10Q8N8L6 244 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 KCNE4Q8WWG9 221 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 TUBGCP5Q96RT8 1024 aa13.23□□□□□ -0.29
RPF1-201ENST00000370654 FOXP3Q9BZS1 431 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms