RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CA3P07451 260 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 LINC00271P0C7V0 271 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 MYLIPQ8WY64 445 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 SLC35B4Q969S0 331 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ZNF669Q96BR6 464 aaPredicted RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 PRICKLE1Q96MT3 831 aaPredicted RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 SHCBP1LQ9BZQ2 653 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 WWP1Q9H0M0 922 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ZBP1Q9H171 429 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 XAB2Q9HCS7 855 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 PPM1HQ9ULR3 514 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 PSAT1Q9Y617 370 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CBX4O00257 560 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 GRM6O15303 877 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 BNIP3LO60238 219 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 RAMP2O60895 175 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 LYPLA1O75608 230 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 PBX2P40425 430 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 CD86P42081 329 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 HCAR3P49019 387 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 CCR3P51677 355 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 CDC16Q13042 620 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 PPIGQ13427 754 aaKnown RBP eCLIP10.74□□□□□ -0.694e-7■□□□□ 9.5
TPM3-212ENST00000368533 RAB33AQ14088 237 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 PTPRRQ15256 657 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 ZRSR2Q15696 482 aaKnown RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 LPCAT4Q643R3 524 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 ARHGAP24Q8N264 748 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 CARNMT1Q8N4J0 409 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 C12orf76Q8N812 135 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 TEKT5Q96M29 485 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 ECSITQ9BQ95 431 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 THTPAQ9BU02 230 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 HERC2P3Q9BVR0 1158 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 AGO1Q9UL18 857 aaKnown RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 TGDSO95455 350 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 ZDHHC11BP0C7U3 371 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 SLC2A3P11169 496 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 EPCAMP16422 314 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 PRKCHP24723 683 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 CCR2P41597 374 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 FASTKD1Q53R41 847 aaKnown RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 FSCBQ5H9T9 825 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 N4BP2L1Q5TBK1 243 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 RBM44Q6ZP01 1051 aaKnown RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 SH2D5Q6ZV89 423 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 ST13P4Q8IZP2 240 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 ZBTB8BQ8NAP8 495 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 KREMEN2Q8NCW0 462 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 OR6K2Q8NGY2 324 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 SKA1Q96BD8 255 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 LRRC39Q96DD0 335 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 FCRL3Q96P31 734 aaPredicted RBP10.74□□□□□ -0.69
TPM3-212ENST00000368533 AGAP2Q99490 1192 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 PFDN4Q9NQP4 134 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 CCL26Q9Y258 94 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
TPM3-212ENST00000368533 TMEM221A6NGB7 291 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 SDR42E2A6NKP2 422 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 SPECC1L-ADORA2AF8WAN1 911 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 TRAFD1O14545 582 aaPredicted RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 ACSL4O60488 711 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 CIB2O75838 187 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 TYK2P29597 1187 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 IHHQ14623 411 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 KCTD21Q4G0X4 260 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 C6orf163Q5TEZ5 329 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 ZNF683Q8IZ20 524 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 HIPK4Q8NE63 616 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 MCUQ8NE86 351 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 MTBPQ96DY7 904 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 PTCD3Q96EY7 689 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 FSD1LQ9BXM9 530 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 UNKQ9C0B0 810 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 GBA3Q9H227 469 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 OLA1Q9NTK5 396 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 PAIP2BQ9ULR5 123 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 HCFC2Q9Y5Z7 792 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 PLXNA4Q9HCM2 1894 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 ALPK3Q96L96 1907 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 TPP1O14773 563 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 MUSKO15146 869 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 FGF10O15520 208 aaPredicted RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 SNAP91O60641 907 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 CTSAP10619 480 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 ANPEPP15144 967 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 ATP6V1B1P15313 513 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 ALOX15P16050 662 aaPredicted RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 PCSK6P29122 969 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 FDFT1P37268 417 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 SERPINB9P50453 376 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 UBAP2LQ14157 1087 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 PTPRCAPQ14761 206 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 LRRC8BQ6P9F7 803 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 WDR75Q8IWA0 830 aaKnown RBP10.73□□□□□ -0.69
TPM3-212ENST00000368533 WFDC5Q8TCV5 224 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 AGR3Q8TD06 166 aa10.73□□□□□ -0.69
TPM3-212ENST00000368533 C2orf15Q8WU43 125 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms