RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 ELK3P41970 407 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 GRIA1P42261 906 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 GEMP55040 296 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 SULT2A1Q06520 285 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 IFFO1Q0D2I5 559 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 RFTN1Q14699 578 aaPredicted RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 PLK5Q496M5 336 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 HSP90B2PQ58FF3 399 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 HP1BP3Q5SSJ5 553 aaPredicted RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 CEP85LQ5SZL2 805 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 KRT222Q8N1A0 295 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
PMF1-201ENST00000368273 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 ZNF366Q8N895 744 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 ATP11CQ8NB49 1132 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 RLN3Q8WXF3 142 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 ZBTB9Q96C00 473 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 PKNOX2Q96KN3 472 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 SIGLEC10Q96LC7 697 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 MKRN2Q9H000 416 aaKnown RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 MUC3BQ9H195 1237 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 SLC6A17Q9H1V8 727 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 LRRC4CQ9HCJ2 640 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 NT5MQ9NPB1 228 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 UBA2Q9UBT2 640 aaPredicted RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 VPS28Q9UK41 221 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 EP300Q09472 2414 aaPredicted RBP13.35□□□□□ -0.27
PMF1-201ENST00000368273 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
PMF1-201ENST00000368273 A0A087WUV0 522 aaPredicted RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 ZNF217O75362 1048 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 TCEA3O75764 348 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 ZMPSTE24O75844 475 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 RETP07949 1114 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 COPAP53621 1224 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 GPX6P59796 221 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 MTM1Q13496 603 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 SPARCL1Q14515 664 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 ZNF235Q14590 738 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 HNRNPA1L2Q32P51 320 aaKnown RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 NAPEPLDQ6IQ20 393 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 KIAA1324Q6UXG2 1013 aaKnown RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 LEKR1Q6ZMV7 388 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 CROCCP2Q86T23 111 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 TMPRSS6Q8IU80 811 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 GOLGA6L1Q8N7Z2 621 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 OR2T3Q8NH03 318 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 IMP4Q96G21 291 aaKnown RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 LOXL4Q96JB6 756 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 RPL10LQ96L21 214 aaKnown RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 ROPN1BQ9BZX4 212 aaPredicted RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 VPS37BQ9H9H4 285 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 ROPN1Q9HAT0 212 aaPredicted RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 CASS4Q9NQ75 786 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 PRSS16Q9NQE7 514 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 HAUS2Q9NVX0 235 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 SEPT3Q9UH03 358 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 SLCO3A1Q9UIG8 710 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
PMF1-201ENST00000368273 GMEB2Q9UKD1 530 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 CHMP2BQ9UQN3 213 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 TTLL3Q9Y4R7 772 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 PLXND1Q9Y4D7 1925 aa13.34□□□□□ -0.27
PMF1-201ENST00000368273 GOLGA6L10A6NI86 522 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 SDR42E2A6NKP2 422 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 TTC34A8MYJ7 566 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 GOLGA8KD6RF30 607 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 AP3B1O00203 1094 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 CBX4O00257 560 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 MAP3K13O43283 966 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 SPAG6O75602 509 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 RHOBTB1O94844 696 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 CPP00450 1065 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 GSTA2P09210 222 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 C7P10643 843 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 BCKDHBP21953 392 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 GLDCP23378 1020 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 PHBP35232 272 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 NNMTP40261 264 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 NUMBP49757 651 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 STK19P49842 368 aaPredicted RBP13.33□□□□□ -0.28
PMF1-201ENST00000368273 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.28
PMF1-201ENST00000368273 NIPAL4Q0D2K0 466 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 MPP3Q13368 585 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 STAT4Q14765 748 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 PMS2CLQ68D20 193 aa13.33□□□□□ -0.28
PMF1-201ENST00000368273 KDELC1Q6UW63 502 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms