RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 STARD3Q14849 445 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 CYP2R1Q6VVX0 501 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 TPGS1Q6ZTW0 290 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 NKAPQ8N5F7 415 aaKnown RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 PTGR2Q8N8N7 351 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 C19orf18Q8NEA5 215 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 ENKURQ8TC29 256 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SEPHS2Q99611 448 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 C6orf62Q9GZU0 229 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 SEMA4BQ9NPR2 832 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 A8MX80 341 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF682O95780 498 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 HDCP19113 662 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 LILRA4P59901 499 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 STXBP5Q5T5C0 1151 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 DENND1CQ8IV53 801 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 XPR1Q9UBH6 696 aa13.34□□□□□ -0.27
PTPRK-204ENST00000368210 TDRKHQ9Y2W6 561 aaKnown RBP13.34□□□□□ -0.27
PTPRK-204ENST00000368210 ROBO1Q9Y6N7 1651 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 CCDC154A6NI56 674 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 ARIH2O95376 493 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.27
PTPRK-204ENST00000368210 ENO2P09104 434 aaPredicted RBP13.33□□□□□ -0.27
PTPRK-204ENST00000368210 PIRTP0C851 137 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 CDC16Q13042 620 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 TRAF3Q13114 568 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 ZFP69Q49AA0 526 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 FNBP1LQ5T0N5 605 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 CERCAMQ5T4B2 595 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 ERAP2Q6P179 960 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 PLEKHM3Q6ZWE6 761 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 SLC44A2Q8IWA5 706 aaPredicted RBP13.33□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF558Q96NG5 402 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 KCTD15Q96SI1 283 aaPredicted RBP13.33□□□□□ -0.27
PTPRK-204ENST00000368210 MRPL57Q9BQC6 102 aaKnown RBP13.33□□□□□ -0.27
PTPRK-204ENST00000368210 WDR41Q9HAD4 459 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 GLOD4Q9HC38 313 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 ZNF221Q9UK13 617 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 PADI3Q9ULW8 664 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 RAP2CQ9Y3L5 183 aa13.33□□□□□ -0.27
PTPRK-204ENST00000368210 MAP3K13O43283 966 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 SEC22BO75396 215 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 CCNKO75909 580 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 PCNAP12004 261 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 POLR2LP62875 67 aaKnown RBP13.33□□□□□ -0.28
PTPRK-204ENST00000368210 CNTN1Q12860 1018 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 CYP1B1Q16678 543 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 RUNDC3AQ59EK9 446 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 ANKRD22Q5VYY1 191 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 NEK5Q6P3R8 708 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 SNX27Q96L92 541 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 PNPLA3Q9NST1 481 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 ZMYM5Q9UJ78 669 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 OR6C75A6NL08 312 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 NDUFB5O43674 189 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 LBPP18428 481 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 GPC1P35052 558 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 TAF5Q15542 800 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 DRICH1Q6PGQ1 229 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-204ENST00000368210 CPNE8Q86YQ8 564 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 SYTL1Q8IYJ3 562 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
PTPRK-204ENST00000368210 RORBQ92753 470 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 COMMD8Q9NX08 183 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 OPTCQ9UBM4 332 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 TNPO3Q9Y5L0 923 aaKnown RBP13.33□□□□□ -0.28
PTPRK-204ENST00000368210 ZBTB48P10074 688 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-204ENST00000368210 EPB42P16452 691 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 HOXD13P35453 343 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 CCL23P55773 120 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 CDK18Q07002 472 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 SPIDRQ14159 915 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 SLC1A5Q15758 541 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 C10orf107Q8IVU9 208 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 BBS7Q8IWZ6 715 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 TM6SF2Q9BZW4 377 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 MAN1C1Q9NR34 630 aa13.33□□□□□ -0.28
PTPRK-204ENST00000368210 MRPL17Q9NRX2 175 aaKnown RBP13.33□□□□□ -0.28
PTPRK-204ENST00000368210 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 DUSP11O75319 330 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 BPGMP07738 259 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 CYP3A5P20815 502 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 IL12AP29459 219 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 CSTF3Q12996 717 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 PTPRNQ16849 979 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 USP41Q3LFD5 358 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 HDAC10Q969S8 669 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 HNRNPABQ99729 332 aaKnown RBP13.32□□□□□ -0.28
PTPRK-204ENST00000368210 DPEP3Q9H4B8 488 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 RHOJQ9H4E5 214 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 CACNA2D2Q9NY47 1150 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
PTPRK-204ENST00000368210 A8MUI8 341 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms