RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 MTAPQ13126 283 aa7.11□□□□□ -1.27
SPTA1-201ENST00000368147 RFWD3Q6PCD5 774 aa7.11□□□□□ -1.27
SPTA1-201ENST00000368147 ARID3BQ8IVW6 561 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-201ENST00000368147 ZNF786Q8N393 782 aa7.11□□□□□ -1.27
SPTA1-201ENST00000368147 MSL3Q8N5Y2 521 aaKnown RBP7.11□□□□□ -1.27
SPTA1-201ENST00000368147 RAD51AP1Q96B01 352 aa7.11□□□□□ -1.27
SPTA1-201ENST00000368147 NEDD4LQ96PU5 975 aa7.11□□□□□ -1.27
SPTA1-201ENST00000368147 C2orf49Q9BVC5 232 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-201ENST00000368147 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 STX16-NPEPL1H3BU86 382 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 STX16O14662 325 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 AHCYL1O43865 530 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 SLC35G4P0C7Q5 338 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 BGNP21810 368 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 HOXC12P31275 282 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 GNPDA1P46926 289 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 GLUD2P49448 558 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ARPC4P59998 168 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PLGLB1Q02325 96 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TROAPQ12815 778 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TRAF3Q13114 568 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ZBTB6Q15916 424 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CYP2A13Q16696 494 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 C1orf94Q6P1W5 598 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 DCLRE1AQ6PJP8 1040 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 LRRC17Q8N6Y2 441 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 C12orf66Q96MD2 445 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 MTMR9Q96QG7 549 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CHID1Q9BWS9 393 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CDHR5Q9HBB8 845 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 NUP50Q9UKX7 468 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 DLC1Q96QB1 1528 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PXDNLA1KZ92 1463 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PXDNQ92626 1479 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 AKAP3O75969 853 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CSH1P0DML2 217 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CSH2P0DML3 217 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 IGFALSP35858 605 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CLCNKBP51801 687 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 MAPK11Q15759 364 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 KCTD21Q4G0X4 260 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 SEL1L3Q68CR1 1132 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ADGRG6Q86SQ4 1221 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ZCCHC7Q8N3Z6 543 aaKnown RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 OR5M3Q8NGP4 307 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CYB5D2Q8WUJ1 264 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PIGKQ92643 395 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 REPS1Q96D71 796 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CYP3A43Q9HB55 503 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ZNF232Q9UNY5 417 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 SLC27A6Q9Y2P4 619 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 IFT172Q9UG01 1749 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PSMD9O00233 223 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TM9SF1O15321 606 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ERAL1O75616 437 aaKnown RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 GYPCP04921 128 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ATP6V1B1P15313 513 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 GDI1P31150 447 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PGDP52209 483 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 SLC6A3Q01959 620 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 RBM20Q5T481 1227 aaKnown RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 AADACL2Q6P093 401 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 VITQ6UXI7 678 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 USP51Q70EK9 711 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 THAP5Q7Z6K1 395 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 IQCF2Q8IXL9 164 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 RAVER1Q8IY67 606 aaKnown RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 GPR135Q8IZ08 494 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ZCCHC10Q8TBK6 192 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CKAP2Q8WWK9 683 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 METTL21AQ8WXB1 218 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ZCCHC17Q9NP64 241 aaKnown RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 VPS45Q9NRW7 570 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TAS2R13Q9NYV9 303 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 OPTCQ9UBM4 332 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 RGS17Q9UGC6 210 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TLR5O60602 858 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 RFX5P48382 616 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 RARRES1P49788 294 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ABATP80404 500 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 CARTPTQ16568 116 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TMEM63BQ5T3F8 832 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 ITCHQ96J02 903 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 TMEM120AQ9BXJ8 343 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 IDI2Q9BXS1 227 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PORCNQ9H237 461 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 VPS33BQ9H267 617 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 PEAK1Q9H792 1746 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 NWD1Q149M9 1564 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 MYH14Q7Z406 1995 aaKnown RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 KLRG2A4D1S0 409 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-201ENST00000368147 VIPP01282 170 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 MSL3P1P0C860 447 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 FGFR3P22607 806 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 MAGEA6P43360 314 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 NRIP1P48552 1158 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 SLC1A6P48664 564 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 GNA13Q14344 377 aa7.1□□□□□ -1.27
SPTA1-201ENST00000368147 LPAL2Q16609 132 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms