RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PSTPIP1O43586 416 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 SDC3O75056 442 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 C6P13671 934 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 IGFALSP35858 605 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 LIG3P49916 1009 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 PFN3P60673 137 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 ITKQ08881 620 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 SLC9A4Q6AI14 798 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 PLD5Q8N7P1 536 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 PDCD6IPQ8WUM4 868 aaKnown RBP24.08■■□□□ 1.45
PFDN2-201ENST00000368010 SPOCK2Q92563 424 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 HDAC11Q96DB2 347 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 IFT43Q96FT9 208 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 POLR1EQ9GZS1 481 aaKnown RBP24.08■■□□□ 1.45
PFDN2-201ENST00000368010 ALG6Q9Y672 507 aa24.08■■□□□ 1.45
PFDN2-201ENST00000368010 CFAP69A5D8W1 941 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 HTRA2O43464 458 aaPredicted RBP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 TNFSF14O43557 240 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 LZTS3O60299 673 aaPredicted RBP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 NEBLO76041 1014 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 ZFXP17010 805 aaPredicted RBP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 CDC25BP30305 580 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 SEMG2Q02383 582 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 SLC10A2Q12908 348 aaPredicted RBP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 PDE1CQ14123 709 aaPredicted RBP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 C11orf63Q6NUN7 778 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 PARGQ86W56 976 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 CCDC13Q8IYE1 715 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 EID2Q8N6I1 236 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 TP53I13Q8NBR0 393 aaPredicted RBP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 CCNYQ8ND76 341 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 SEMA3CQ99985 751 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 GOLPH3Q9H4A6 298 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 RBM22Q9NW64 420 aaKnown RBP eCLIP24.07■■□□□ 1.44
PFDN2-201ENST00000368010 IMPACTQ9P2X3 320 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 AMACRQ9UHK6 382 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 WASF3Q9UPY6 502 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 COQ6Q9Y2Z9 468 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 HEY1Q9Y5J3 304 aa24.07■■□□□ 1.44
PFDN2-201ENST00000368010 SPTY2D1-AS1A0A0U1RR47 76 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 CPP00450 1065 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 CCNB1P14635 433 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 NFKBIAP25963 317 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 THOP1P52888 689 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 TRAF2Q12933 501 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 RALGDSQ12967 914 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 LRRC14Q15048 493 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 RAD9BQ6WBX8 426 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 DPPA4Q7L190 304 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 KANSL1Q7Z3B3 1105 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 RFX6Q8HWS3 928 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 BAG1Q99933 345 aaPredicted RBP24.06■■□□□ 1.44
PFDN2-201ENST00000368010 MBNL1Q9NR56 388 aaKnown RBP24.06■■□□□ 1.44
PFDN2-201ENST00000368010 DNAJC28Q9NX36 388 aa24.06■■□□□ 1.44
PFDN2-201ENST00000368010 TOR1BO14657 336 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 HYAL3O43820 417 aaPredicted RBP24.05■■□□□ 1.44
PFDN2-201ENST00000368010 TOP3BO95985 862 aaKnown RBP24.05■■□□□ 1.44
PFDN2-201ENST00000368010 ATXN1LP0C7T5 689 aaKnown RBP24.05■■□□□ 1.44
PFDN2-201ENST00000368010 YPEL5P62699 121 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 PTK2BQ14289 1009 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 FZD2Q14332 565 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 AGERQ15109 404 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 IRF4Q15306 451 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 MFSD7Q6UXD7 560 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 KDM7AQ6ZMT4 941 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 PNPLA1Q8N8W4 532 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 LRRN4Q8WUT4 740 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 ADAMTS14Q8WXS8 1223 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 PHTF1Q9UMS5 762 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 TTLL3Q9Y4R7 772 aa24.05■■□□□ 1.44
PFDN2-201ENST00000368010 ANKRD36A6QL64 1941 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 SHROOM3Q8TF72 1996 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 GOLGA8CPA6NN73 597 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 PIAS2O75928 621 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 PGLSO95336 258 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 LDOC1O95751 146 aaPredicted RBP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 ELFN1P0C7U0 828 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 SPINK2P20155 84 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 CES1P23141 567 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 HNRNPKP61978 463 aaKnown RBP eCLIP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 PPIDQ08752 370 aaKnown RBP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 WSCD2Q2TBF2 565 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 ZNF542PQ5EBM4 170 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 ARMC12Q5T9G4 340 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 ALG1LQ6GMV1 187 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 RAB44Q7Z6P3 723 aaPredicted RBP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 SLCO6A1Q86UG4 719 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 SPC24Q8NBT2 197 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 CNDP2Q96KP4 475 aaKnown RBP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 CALR3Q96L12 384 aaKnown RBP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 LGMNQ99538 433 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 SCNM1Q9BWG6 230 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 TOR4AQ9NXH8 423 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 B4GALT6Q9UBX8 382 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 REXO2Q9Y3B8 237 aaKnown RBP24.04■■□□□ 1.44
PFDN2-201ENST00000368010 RAI2Q9Y5P3 530 aa24.04■■□□□ 1.44
PFDN2-201ENST00000368010 RCCD1A6NED2 376 aa24.03■■□□□ 1.44
PFDN2-201ENST00000368010 H3BM21 787 aa24.03■■□□□ 1.44
PFDN2-201ENST00000368010 PPP1R12AO14974 1030 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms