RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 TTC7BQ86TV6 843 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 MARCH9Q86YJ5 346 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 PLPP6Q8IY26 295 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 SMIM14Q96QK8 99 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 PSKH2Q96QS6 385 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 HERPUD2Q9BSE4 406 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 ATP13A3Q9H7F0 1226 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 PCDH12Q9NPG4 1184 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 SCUBE2Q9NQ36 999 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 DDX56Q9NY93 547 aaKnown RBP14.79□□□□□ -0.04
SF3B5-201ENST00000367569 SEPT10Q9P0V9 454 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 PCDHGC4Q9Y5F7 938 aa14.79□□□□□ -0.04
SF3B5-201ENST00000367569 ITPR1Q14643 2758 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 A0A1W2PR77 199 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 F5H423 210 aaPredicted RBP14.78□□□□□ -0.04
SF3B5-201ENST00000367569 VILLO15195 856 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 PCDHGA12O60330 932 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 FTCDO95954 541 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 SERPINA4P29622 427 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 CDKN2BP42772 138 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 CCT8P50990 548 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 BCL2L1Q07817 233 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 ZBTB17Q13105 803 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 RFTN1Q14699 578 aaPredicted RBP14.78□□□□□ -0.04
SF3B5-201ENST00000367569 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 SLC9A4Q6AI14 798 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 GCNT7Q6ZNI0 430 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 PTAR1Q7Z6K3 402 aaPredicted RBP14.78□□□□□ -0.04
SF3B5-201ENST00000367569 NSMCE1Q8WV22 266 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 LRIG1Q96JA1 1093 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 ZNF830Q96NB3 372 aaPredicted RBP14.78□□□□□ -0.04
SF3B5-201ENST00000367569 ZNF599Q96NL3 588 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 MGME1Q9BQP7 344 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 KDM4CQ9H3R0 1056 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 SUV39H2Q9H5I1 410 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 GRPEL1Q9HAV7 217 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 NOD2Q9HC29 1040 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 CAPN6Q9Y6Q1 641 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 KNTC1P50748 2209 aa14.78□□□□□ -0.04
SF3B5-201ENST00000367569 LRP4O75096 1905 aa14.77□□□□□ -0.04
SF3B5-201ENST00000367569 A0A0U1RQS6 177 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 A0A1B0GTQ1 180 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 TSPAN11A1L157 253 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 PJA2O43164 708 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 SDC3O75056 442 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 NEBLO76041 1014 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 PAK4O96013 591 aaPredicted RBP14.77□□□□□ -0.05
SF3B5-201ENST00000367569 CPP00450 1065 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 HOXB3P14651 431 aaPredicted RBP14.77□□□□□ -0.05
SF3B5-201ENST00000367569 GRK6P43250 576 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 AP1S1P61966 158 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 AP1B1Q10567 949 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 IFI16Q16666 785 aaKnown RBP14.77□□□□□ -0.05
SF3B5-201ENST00000367569 SPATS2Q86XZ4 545 aaKnown RBP14.77□□□□□ -0.05
SF3B5-201ENST00000367569 GATAD2AQ86YP4 633 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 CCDC13Q8IYE1 715 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 KATNAL2Q8IYT4 538 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 OR13H1Q8NG92 308 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 MDM1Q8TC05 714 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 CXorf40AQ8TE69 158 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 SEMA3CQ99985 751 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 FAM118BQ9BPY3 351 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 MAK16Q9BXY0 300 aaKnown RBP14.77□□□□□ -0.05
SF3B5-201ENST00000367569 CPEB1Q9BZB8 566 aaKnown RBP14.77□□□□□ -0.05
SF3B5-201ENST00000367569 LHX6Q9UPM6 363 aa14.77□□□□□ -0.05
SF3B5-201ENST00000367569 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 PRAMEF26H0Y7S4 382 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 AREL1O15033 823 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 TNFSF14O43557 240 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 AP1G1O43747 822 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 CST8O60676 142 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 THEGLP0DJG4 465 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 CTPS1P17812 591 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 CR2P20023 1033 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 HNRNPA2B1P22626 353 aaKnown RBP14.76□□□□□ -0.05
SF3B5-201ENST00000367569 AKT2P31751 481 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 MMP12P39900 470 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 GSDMDP57764 484 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 RPS21P63220 83 aaKnown RBP14.76□□□□□ -0.05
SF3B5-201ENST00000367569 CCDC15Q0P6D6 951 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 ZNF211Q13398 564 aaPredicted RBP14.76□□□□□ -0.05
SF3B5-201ENST00000367569 IHHQ14623 411 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 STAT4Q14765 748 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 SHBQ15464 509 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 CCDC157Q569K6 752 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 TPRG1LQ5T0D9 272 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 DENND2CQ68D51 928 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 KIAA1161Q6NSJ0 714 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 BBS5Q8N3I7 341 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 LRRC57Q8N9N7 239 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 TMEM145Q8NBT3 493 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 ALG3Q92685 438 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 HDAC11Q96DB2 347 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 NUDCD1Q96RS6 583 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 TUBGCP5Q96RT8 1024 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 ELF4Q99607 663 aaPredicted RBP14.76□□□□□ -0.05
SF3B5-201ENST00000367569 SLC17A9Q9BYT1 436 aa14.76□□□□□ -0.05
SF3B5-201ENST00000367569 CCDC86Q9H6F5 360 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms