RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ZNF23P17027 643 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF10P21506 573 aaPredicted RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PPP2R1BP30154 601 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 DGKGP49619 791 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 GPR15P49685 360 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF655Q8N720 491 aaPredicted RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 QRFPRQ96P65 431 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SLC25A23Q9BV35 468 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 KLHL28Q9NXS3 571 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 NDUFAF1Q9Y375 327 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 UBOX5O94941 541 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 MAPKAPK2P49137 400 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 TEAD4Q15561 434 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 RASGEF1CQ8N431 466 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 GPR156Q8NFN8 814 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 KCTD4Q8WVF5 259 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 KLQ9UEF7 1012 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PRKAG3Q9UGI9 489 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 ALBP02768 609 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 MYBL2P10244 700 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CXCR2P25025 360 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 GPD2P43304 727 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CDH4P55283 916 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 TRIP4Q15650 581 aaPredicted RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 IL27RAQ6UWB1 636 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PACS1Q6VY07 963 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 GATAD2AQ86YP4 633 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PHYKPLQ8IUZ5 450 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SLC41A1Q8IVJ1 513 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 TIFAQ96CG3 184 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SNX13Q9Y5W8 968 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PARP4Q9UKK3 1724 aaKnown RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 ABHD14A-ACY1A0A1B0GW23 586 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CRYBG2Q8N1P7 616 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 POMGNT2Q8NAT1 580 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SELENOMQ8WWX9 145 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 MAGEH1Q9H213 219 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 ZFP37Q9Y6Q3 630 aaPredicted RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SLC38A8A6NNN8 435 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CHURC1-FNTBB4DL54 471 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 RGS14O43566 566 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 AVILO75366 819 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 VIPP01282 170 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CDKN2BP42772 138 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 RAB10P61026 200 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 LYPLAL1Q5VWZ2 237 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 FAM180AQ6UWF9 173 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 PIWIL4Q7Z3Z4 852 aaKnown RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 EXOSC4Q9NPD3 245 aaKnown RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 USE1Q9NZ43 259 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 OR10H1Q9Y4A9 318 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 FFAR3O14843 346 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 GPR42O15529 346 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 MAGEC1O60732 1142 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 KRT33AO76009 404 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 BMP10O95393 424 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SLC10A3P09131 477 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 FOSL2P15408 326 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 NQO1P15559 274 aaKnown RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CCNCP24863 283 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 MC4RP32245 332 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CAPRIN2Q6IMN6 1127 aaKnown RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 RBFAQ8N0V3 343 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 CCDC185Q8N715 623 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 POF1BQ8WVV4 589 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 ACE2Q9BYF1 805 aaPredicted RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 FCF1Q9Y324 198 aaKnown RBP11.64□□□□□ -0.55
SYNE1-204ENST00000367248 SNX10Q9Y5X0 201 aa11.64□□□□□ -0.55
SYNE1-204ENST00000367248 IFT172Q9UG01 1749 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 NDST3O95803 873 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 FAM163BP0C2L3 166 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 KELP23276 732 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 CAP1Q01518 475 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SRSF11Q05519 484 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SYT12Q8IV01 421 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 C12orf76Q8N812 135 aaPredicted RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TRPC4APQ8TEL6 797 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 VPS33AQ96AX1 596 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 SLC27A6Q9Y2P4 619 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 ASB3Q9Y575 518 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 LBPP18428 481 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 FASTKQ14296 549 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 RIPOR1Q6ZS17 1223 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 DEFB107AQ8IZN7 70 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 RTL3Q8N8U3 475 aaKnown RBP11.63□□□□□ -0.55
SYNE1-204ENST00000367248 LRRC57Q8N9N7 239 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 KLHL23Q8NBE8 558 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 OR7D4Q8NG98 312 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 FANCEQ9HB96 536 aa11.63□□□□□ -0.55
SYNE1-204ENST00000367248 ENTPD4Q9Y227 616 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms