RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 RPL38P63173 70 aaKnown RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 CES3Q6UWW8 571 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 C12orf56Q8IXR9 622 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 DEFB106AQ8N104 65 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 TSEN2Q8NCE0 465 aaKnown RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 ELMO1Q92556 727 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 RCN3Q96D15 328 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 PHF12Q96QT6 1004 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 SUCOQ9UBS9 1254 aaKnown RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 KCNK1O00180 336 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 AZIN1O14977 448 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 C9P02748 559 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 CSF1RP07333 972 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 SPATA19Q7Z5L4 167 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 GJD3Q8N144 294 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 PNPT1Q8TCS8 783 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 HTRA1Q92743 480 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 DIRAS2Q96HU8 199 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 ZDHHC15Q96MV8 337 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 POP1Q99575 1024 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 CEP41Q9BYV8 373 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 XPR1Q9UBH6 696 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 SLC30A4O14863 429 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 AP5Z1O43299 807 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 SASH3O75995 380 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 ALDH2P05091 517 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 MYBL2P10244 700 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 CDH5P33151 784 aaPredicted RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 C1orf189Q5VU69 101 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 FAM98AQ8NCA5 519 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 ACE2Q9BYF1 805 aaPredicted RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 AVILO75366 819 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 RSL1D1O76021 490 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 TFEBP19484 476 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 CTSKP43235 329 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 AMIGO2Q86SJ2 522 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 LGI2Q8N0V4 545 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 PCSK9Q8NBP7 692 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 SPACA7Q96KW9 195 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 NKIRAS2Q9NYR9 191 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 TFRCP02786 760 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 IFNA16P05015 189 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 EFCAB3Q8N7B9 438 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 EHD1Q9H4M9 534 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 MRTO4Q9UKD2 239 aaKnown RBP16.82■□□□□ 0.28
NID1-202ENST00000366595 PCDHGB3Q9Y5G1 929 aa16.82■□□□□ 0.28
NID1-202ENST00000366595 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.285e-50■■■■□ 25.7
NID1-202ENST00000366595 OR10H2O60403 315 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 DNAJA2O60884 412 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 UGT2B17O75795 530 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 PTGS2P35354 604 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 FCGRTP55899 365 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 TUBB3Q13509 450 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 E2F2Q14209 437 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 NFIXQ14938 502 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 CLEC10AQ8IUN9 316 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 TRAPPC5Q8IUR0 188 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 EDEM1Q92611 657 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 MTFMTQ96DP5 389 aaKnown RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 AIFM2Q9BRQ8 373 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 MEMO1Q9Y316 297 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 CABYRO75952 493 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 VPS26BQ4G0F5 336 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 FOXR1Q6PIV2 292 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 FBXO33Q7Z6M2 555 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 TMEM86AQ8N2M4 240 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 FATE1Q969F0 183 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 GNEQ9Y223 722 aaKnown RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 OAS3Q9Y6K5 1087 aaKnown RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 CCL15-CCL14A0A0B4J2E2 113 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 BTNL10A8MVZ5 291 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 DCDC2CA8MYV0 355 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 GTPBP1O00178 669 aaKnown RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 CDC25CP30307 473 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 SREBF2Q12772 1141 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 TBX2Q13207 712 aaPredicted RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 CCL15Q16663 113 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 C2orf49Q9BVC5 232 aaPredicted RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 C3orf14Q9HBI5 128 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 CCDC177Q9NQR7 707 aaPredicted RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 MED11Q9P086 117 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 MARK1Q9P0L2 795 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 FAM86B2P0C5J1 330 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 RPL22P35268 128 aaKnown RBP16.81■□□□□ 0.28
NID1-202ENST00000366595 GALK1P51570 392 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 ISLR2Q6UXK2 745 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 UNC5AQ6ZN44 842 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 ARL10Q8N8L6 244 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 OR2T12Q8NG77 320 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 FUCA2Q9BTY2 467 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 CDH19Q9H159 772 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 ACSS3Q9H6R3 686 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 ABCC13Q9NSE7 274 aa16.81■□□□□ 0.28
NID1-202ENST00000366595 DDX3YO15523 660 aaKnown RBP16.8■□□□□ 0.28
NID1-202ENST00000366595 SLC22A3O75751 556 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 GSTT2BP0CG30 244 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms