RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SALL4Q9UJQ4 1053 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LUC7L2Q9Y383 392 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ADAMTS20P59510 1910 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IGSF10Q6WRI0 2623 aa13.77□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ANKRD36A6QL64 1941 aa13.77□□□□□ -0.2
TNFRSF1A-202ENST00000366159 A0A087WV48 116 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 H3BM21 787 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 H3BRJ5 948 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DFFAO00273 331 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MAFKO60675 156 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 GM2AP17900 193 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SERPINA4P29622 427 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ARSEP51690 589 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DAB2P98082 770 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RALGDSQ12967 914 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LBRQ14739 615 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LRRC14Q15048 493 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 IRF4Q15306 451 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ASTE1Q2TB18 679 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RBFAQ8N0V3 343 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NUP85Q9BW27 656 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CINPQ9BW66 212 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 BOCQ9BWV1 1114 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CLPBQ9H078 707 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ATP13A3Q9H7F0 1226 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SP110Q9HB58 689 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 IP6K2Q9UHH9 426 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CLCA2Q9UQC9 943 aa13.77□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SMG1Q96Q15 3661 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 EME2A4GXA9 379 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LMO7DNF2Z398 122 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HTRA2O43464 458 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 OPA1O60313 960 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MT-CO3P00414 261 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PRKCGP05129 697 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 XPAP23025 273 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CASP14P31944 242 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ARL4AP40617 200 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SCNN1BP51168 640 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RENBPP51606 427 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 THOP1P52888 689 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HS1BP3Q53T59 392 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TMCO4Q5TGY1 634 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ERAP2Q6P179 960 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LIPIQ6XZB0 460 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CBARPQ8N350 705 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PGBD5Q8N414 524 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HSPH1Q92598 858 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NXPE2Q96DL1 559 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LRRC61Q9BV99 259 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SPASTQ9UBP0 616 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SEPT3Q9UH03 358 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 APOBEC3BQ9UH17 382 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ANAPC7Q9UJX3 599 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LRP4O75096 1905 aa13.76□□□□□ -0.21
TNFRSF1A-202ENST00000366159 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TTC24A2A3L6 582 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TMEM110-MUSTN1A8MSY1 372 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TRIM23P36406 574 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DUSP3P51452 185 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 AP1S1P61966 158 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 SEMG2Q02383 582 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 INPP5AQ14642 412 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DEFB133Q30KQ1 61 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CCDC122Q5T0U0 273 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TMCO3Q6UWJ1 677 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NYAP1Q6ZVC0 841 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 DPPA4Q7L190 304 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LMX1AQ8TE12 382 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MGME1Q9BQP7 344 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 APOOQ9BUR5 198 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 XPO4Q9C0E2 1151 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 NCKIPSDQ9NZQ3 722 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 RCOR3Q9P2K3 495 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
TNFRSF1A-202ENST00000366159 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MYO1FO00160 1098 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 YY2O15391 372 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TLX3O43711 291 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 CD48P09326 243 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 TSHRP16473 764 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PTMSP20962 102 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HSPA9P38646 679 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 HK3P52790 923 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 ADKP55263 362 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 POLR2LP62875 67 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 PPARDQ03181 441 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 MTM1Q13496 603 aa13.74□□□□□ -0.21
TNFRSF1A-202ENST00000366159 C1orf61Q13536 156 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms