RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SMYD2Q9NRG4 433 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 C9orf78Q9NZ63 289 aaPredicted RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 SLC13A4Q9UKG4 626 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 PROCRQ9UNN8 238 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 NFE2L3Q9Y4A8 694 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 CYP46A1Q9Y6A2 500 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 LOC102724159A0A0B4J2E5 919 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 A0A0U1RQJ8 604 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 CCDC196A0A1B0GTZ2 297 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 A0A1W2PQM1 296 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ACOT8O14734 319 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 TSPAN4O14817 238 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 BCAT2O15382 392 aaPredicted RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ZIC3O60481 467 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 NDUFB4O95168 129 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 F9P00740 461 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 TGFB3P10600 412 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ETFAP13804 333 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 XBP1P17861 261 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 AGAP20933 346 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ART1P52961 327 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 DDR1Q08345 913 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 MYBPHQ13203 477 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ITGADQ13349 1161 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 PPP2R5BQ15173 497 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 PWP2Q15269 919 aaKnown RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 RNPS1Q15287 305 aaKnown RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 EFNB3Q15768 340 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 MMEL1Q495T6 779 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 SETMARQ53H47 684 aaPredicted RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 SGO1Q5FBB7 561 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 XKR9Q5GH70 373 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 EFHC1Q5JVL4 640 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 FAM69AQ5T7M9 428 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 C9orf57Q5W0N0 161 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 HIST2H2BCQ6DN03 193 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 HIST2H2BDQ6DRA6 164 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ANKRD54Q6NXT1 300 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 FBXO46Q6PJ61 603 aaPredicted RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 KLHL24Q6TFL4 600 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 H1FNTQ75WM6 255 aaPredicted RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 RRM2BQ7LG56 351 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 TCP11L2Q8N4U5 519 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ZNF114Q8NC26 417 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 NOC3LQ8WTT2 800 aaKnown RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 WASF1Q92558 559 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 OTULINQ96BN8 352 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 RRP36Q96EU6 259 aaKnown RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 FAM84BQ96KN1 310 aaPredicted RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 AGXT2Q9BYV1 514 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 PAIP1Q9H074 479 aaKnown RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 SLC25A18Q9H1K4 315 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 C6orf106Q9H6K1 298 aaPredicted RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 PPP1R14DQ9NXH3 145 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 SLC9A2Q9UBY0 812 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 SARDHQ9UL12 918 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 ARHGAP26Q9UNA1 814 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 FAM96BQ9Y3D0 163 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 LSM4Q9Y4Z0 139 aaKnown RBP3.28□□□□□ -1.88
RNU4-48P-201ENST00000365559 A0A1B0GVC2 190 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 hDV102S1A0JD36 115 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 CPED1A4D0V7 1026 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 A6NLC8 198 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 SNAP23O00161 211 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 WNT9BO14905 357 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 TNFSF14O43557 240 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 MT-CYBP00156 380 aaPredicted RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 TFP02787 698 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 SHMT1P34896 483 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 PAFAH1B1P43034 410 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 TUBA1BP68363 451 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 PTP4A2Q12974 167 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 HIST2H2ACQ16777 129 aaPredicted RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 IZUMO4Q1ZYL8 232 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 RHBDF2Q6PJF5 856 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 CPLX2Q6PUV4 134 aaKnown RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 B3GNT6Q6ZMB0 384 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 MTSS1LQ765P7 747 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZC3HC1Q86WB0 502 aaKnown RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC35F3Q8IY50 421 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 DCP1BQ8IZD4 617 aaKnown RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZCCHC9Q8N567 271 aaKnown RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 LILRB1Q8NHL6 650 aaPredicted RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 FBXL8Q96CD0 374 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 KLHL29Q96CT2 875 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 PABPC5Q96DU9 382 aaKnown RBP3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 RTP4Q96DX8 246 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 SCMH1Q96GD3 660 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 TBATAQ96M53 351 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 CSF3RQ99062 836 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 USP44Q9H0E7 712 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 TKTL2Q9H0I9 626 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 PLEKHA4Q9H4M7 779 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAREM1Q9H706 876 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 VEZTQ9HBM0 779 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 MAGEE1Q9HCI5 957 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 NOX4Q9NPH5 578 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 WWOXQ9NZC7 414 aa3.27□□□□□ -1.89
RNU4-48P-201ENST00000365559 KCND2Q9NZV8 630 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms