RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 DDX31Q9H8H2 851 aaKnown RBP4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 SAGE1Q9NXZ1 904 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 KIAA1456Q9P272 454 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 HSPB7Q9UBY9 170 aa4.63□□□□□ -1.67
RNU4-28P-201ENST00000364739 EME2A4GXA9 379 aaPredicted RBP4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 RRN3P2A6NIE6 340 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 DDNO94850 711 aaPredicted RBP4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 HNRNPA1P09651 372 aaKnown RBP eCLIP4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 DLG1Q12959 904 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 MMEL1Q495T6 779 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 HIST2H2BCQ6DN03 193 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 HIST2H2BDQ6DRA6 164 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 FBXO46Q6PJ61 603 aaPredicted RBP4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF354CQ86Y25 554 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 MYRIPQ8NFW9 859 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 CREB3L4Q8TEY5 395 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 RND1Q92730 232 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 SNAPC3Q92966 411 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 IGSF21Q96ID5 467 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 SIN3AQ96ST3 1273 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF556Q9HAH1 456 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 DDX4Q9NQI0 724 aaKnown RBP4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 CDC14AQ9UNH5 594 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 NFE2L3Q9Y4A8 694 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 LSM4Q9Y4Z0 139 aaKnown RBP4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 NFS1Q9Y697 457 aa4.62□□□□□ -1.67
RNU4-28P-201ENST00000364739 LOC102724159A0A0B4J2E5 919 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 DENND3A2RUS2 1198 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 TNPO2O14787 897 aaKnown RBP4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 BCAT2O15382 392 aaPredicted RBP4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 KDM4BO94953 1096 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 CLDN14O95500 239 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 PCNAP12004 261 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 ETFAP13804 333 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 PSMC2P35998 433 aaKnown RBP4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 BRWD1-AS2P59051 145 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 UFM1P61960 85 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 GALNT2Q10471 571 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 PWP2Q15269 919 aaKnown RBP4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 TMEM81Q6P7N7 255 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 KLHL24Q6TFL4 600 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 NEK9Q8TD19 979 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 APOPT1Q96IL0 206 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 BBS4Q96RK4 519 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 GLIS2Q9BZE0 524 aaPredicted RBP4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 SMYD2Q9NRG4 433 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 C20orf141Q9NUB4 165 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 KCNS2Q9ULS6 477 aa4.61□□□□□ -1.67
RNU4-28P-201ENST00000364739 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 SNAP23O00161 211 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 CAMTA2O94983 1202 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 IFIT1P09914 478 aaKnown RBP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 G6PDP11413 515 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 POU1F1P28069 291 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 EIF2S3P41091 472 aaKnown RBP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 GPD2P43304 727 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 PEX5P50542 639 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 TUBP50607 506 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 RPP30P78346 268 aaKnown RBP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 SNTA1Q13424 505 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 PPP2R5BQ15173 497 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF718Q3SXZ3 478 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 SGO1Q5FBB7 561 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 ANKRD54Q6NXT1 300 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 Q6ZTC4 211 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 TMTC1Q8IUR5 882 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZCCHC9Q8N567 271 aaKnown RBP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 WFIKKN2Q8TEU8 576 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 DNASE2BQ8WZ79 361 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 MTBPQ96DY7 904 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 C3orf30Q96M34 536 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 KLHL15Q96M94 604 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 LRRC4Q9HBW1 653 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 BEX4Q9NWD9 120 aaPredicted RBP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLC25A10Q9UBX3 287 aaPredicted RBP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 CARD8Q9Y2G2 431 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 WDR81Q562E7 1941 aa4.6□□□□□ -1.67
RNU4-28P-201ENST00000364739 A0A087WYN8 130 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 TEX13CA0A0J9YWL9 993 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 GOLGA6L10A0A0M3HER8 536 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 CPED1A4D0V7 1026 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 SOCS6O14544 535 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 CLGNO14967 610 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 NDUFS7O75251 213 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 GUCY1B2O75343 617 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 MTA2O94776 668 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 ZNF432O94892 652 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 HEXAP06865 529 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 SNRNP70P08621 437 aaKnown RBP4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 IGHV4-30-4P0DP06 118 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 HNRNPH1P31943 449 aaKnown RBP4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 CCT5P48643 541 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 TRPC3Q13507 836 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 C2orf68Q2NKX9 166 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLC9B1Q4ZJI4 515 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLC9C2Q5TAH2 1124 aa4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 CPLX2Q6PUV4 134 aaKnown RBP4.59□□□□□ -1.67
RNU4-28P-201ENST00000364739 SLC35F3Q8IY50 421 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms