RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 AADATQ8N5Z0 425 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 C19orf60Q96EN9 201 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 NODALQ96S42 347 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 SNTG2Q9NY99 539 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 PTBP2Q9UKA9 531 aaKnown RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 COL1A1P02452 1464 aaPredicted RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 BTN3A1O00481 513 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PORP16435 677 aaPredicted RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 TWF1Q12792 350 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 STXBP5Q5T5C0 1151 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PAOXQ6QHF9 649 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PROSER1Q86XN7 944 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 MAGEL2Q9UJ55 1249 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PADI4Q9UM07 663 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 OAZ3Q9UMX2 235 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 COPG1Q9Y678 874 aaKnown RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 C2CD4BA6NLJ0 364 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 KCNH1O95259 989 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PCLAFQ15004 111 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 CLEC6AQ6EIG7 209 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 FAM9CQ8IZT9 166 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 STAG3L4Q8TBR4 150 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 HDAC10Q969S8 669 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 TEKT5Q96M29 485 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 ELOVL4Q9GZR5 314 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 OR12D3Q9UGF7 316 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 FAM50BQ9Y247 325 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 MDM4O15151 490 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 FGF3P11487 239 aaPredicted RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 HOXB8P17481 243 aaPredicted RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 IDH2P48735 452 aaKnown RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PRIM2P49643 509 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 RENBPP51606 427 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 LIPEQ05469 1076 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 KRT73Q86Y46 540 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 SPPL2AQ8TCT8 520 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 FBXL18Q96ME1 805 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 TKTL2Q9H0I9 626 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PDGFCQ9NRA1 345 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 IFT80Q9P2H3 777 aaPredicted RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 PDE10AQ9Y233 779 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 TBC1D30Q9Y2I9 924 aa16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 WBP11Q9Y2W2 641 aaKnown RBP16.05■□□□□ 0.16
CLSTN1-201ENST00000361311 FOXD2O60548 495 aaPredicted RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ALDH4A1P30038 563 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 SEMA5AQ13591 1074 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 CPSF7Q8N684 471 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 GPR63Q9BZJ6 419 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 TRMT13Q9NUP7 481 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 FAIMQ9NVQ4 179 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 SUCOQ9UBS9 1254 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 U3KQV3 271 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 TSPAN3O60637 253 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 MYL3P08590 195 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 SERPINH1P50454 418 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ENPEPQ07075 957 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 TRIQKQ629K1 86 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ROPN1LQ96C74 230 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ALG2Q9H553 416 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 REEP1Q9H902 201 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF221Q9UK13 617 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 PSME2Q9UL46 239 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 LAMA4Q16363 1823 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 PRR23D1E9PI22 279 aaPredicted RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 AREL1O15033 823 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 HTRA2O43464 458 aaPredicted RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 PRR23D2P0DMB1 279 aaPredicted RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 SLC26A2P50443 739 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 IRF9Q00978 393 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 DDX39BQ13838 428 aaKnown RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 LY6KQ17RY6 165 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ZFP69Q49AA0 526 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 TMEM53Q6P2H8 277 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 LCLAT1Q6UWP7 414 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF605Q86T29 641 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 PACRGLQ8N7B6 248 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 C2orf69Q8N8R5 385 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 CCNB1IP1Q9NPC3 277 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 OXSMQ9NWU1 459 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 UMPSP11172 480 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 GCNT7Q6ZNI0 430 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 CDH24Q86UP0 819 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 PIGZQ86VD9 579 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 RPRD1AQ96P16 312 aaPredicted RBP16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 ULBP1Q9BZM6 244 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 TNFSF13BQ9Y275 285 aa16.04■□□□□ 0.16
CLSTN1-201ENST00000361311 CAMTA1Q9Y6Y1 1673 aa16.03■□□□□ 0.16
CLSTN1-201ENST00000361311 CILPO75339 1184 aa16.03■□□□□ 0.16
CLSTN1-201ENST00000361311 SEC22BO75396 215 aa16.03■□□□□ 0.16
CLSTN1-201ENST00000361311 SLC22A3O75751 556 aa16.03■□□□□ 0.16
CLSTN1-201ENST00000361311 CDK4P11802 303 aa16.03■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF182P17025 639 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms