RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MAGEC1O60732 1142 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 TSPAN19P0C672 248 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 GRM5P41594 1212 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 GSTM5P46439 218 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 OR4L1Q8NH43 312 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 APOPT1Q96IL0 206 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 AP3D1O14617 1153 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 CCNYL3P0C7X3 344 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 NT5EP21589 574 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 JAK1P23458 1154 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 VHLP40337 213 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 NEK3P51956 506 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SLC25A24Q6NUK1 477 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SRLQ86TD4 932 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 KCT2Q8NC54 265 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 VANGL1Q8TAA9 524 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 OGDHLQ9ULD0 1010 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 CCL22O00626 93 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 FASP25445 335 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SERPINB1P30740 379 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 CXCR3P49682 368 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SLC38A3Q99624 504 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.38■□□□□ 0.852e-6■□□□□ 9.8
CDC42BPB-201ENST00000361246 RBM7Q9Y580 266 aaKnown RBP20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 HNRNPLP14866 589 aaKnown RBP eCLIP20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 CXCR2P25025 360 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 CERCAMQ5T4B2 595 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 ATP6AP2A0A1C7CYW4 349 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 PSMD11O00231 422 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 MYL12BO14950 172 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 ATP6AP2O75787 350 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 ZNF671Q8TAW3 534 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 STAG3L4Q8TBR4 150 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 CDRT15Q96T59 188 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 CDADC1Q9BWV3 514 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 A0A1W2PRU2 124 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 NFATC1O95644 943 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 ALDH4A1P30038 563 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 KRT73Q86Y46 540 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 CYB5D2Q8WUJ1 264 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 APBB2Q92870 758 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 QRFPRQ96P65 431 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 TBC1D23Q9NUY8 699 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 ZNF624Q9P2J8 865 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 SH3BP5LQ7L8J4 393 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 EPS8L1Q8TE68 723 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 GAL3ST4Q96RP7 486 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 KLHL4Q9C0H6 718 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 TOP3BO95985 862 aaKnown RBP20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 HK2P52789 917 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 GTF2BQ00403 316 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 RRP1BQ14684 758 aaKnown RBP20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 NRF1Q16656 503 aa20.37■□□□□ 0.85
CDC42BPB-201ENST00000361246 NQO1P15559 274 aaKnown RBP20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 TALDO1P37837 337 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 ZIK1Q3SY52 487 aaPredicted RBP20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 SLC24A2Q9UI40 661 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 SLIT1O75093 1534 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 CALB2P22676 271 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 CASP9P55211 416 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 AKIRIN2Q53H80 203 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 ARMC8Q8IUR7 673 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 PTPN2P17706 415 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 IGFALSP35858 605 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 MAPK11Q15759 364 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 METTL21AQ8WXB1 218 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 C8AP07357 584 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 GNPDA1P46926 289 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 ACAP2Q15057 778 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 NPAS4Q8IUM7 802 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 SETD7Q8WTS6 366 aaKnown RBP20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 FAM163AQ96GL9 167 aaPredicted RBP20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 AGO3Q9H9G7 860 aaKnown RBP20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 STARD13Q9Y3M8 1113 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 DCCP43146 1447 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 CCND1P24385 295 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 GRIA4P48058 902 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 GALNT13Q8IUC8 556 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 MCEMP1Q8IX19 187 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 SLITRK2Q9H156 845 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 ZNF510Q9Y2H8 683 aa20.36■□□□□ 0.85
CDC42BPB-201ENST00000361246 LGR5O75473 907 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 PRG2P13727 222 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 GDI1P31150 447 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 MARCKSL1P49006 195 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 PGDP52209 483 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 MYBPC2Q14324 1141 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 DBF4BQ8NFT6 615 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 JOSD2Q8TAC2 188 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 OR6C75A6NL08 312 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 TEX28O15482 410 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 IDH2P48735 452 aaKnown RBP20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 HDDC2Q7Z4H3 204 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 IFNL1Q8IU54 200 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 RNF157Q96PX1 679 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 PPLO60437 1756 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 TTC24A2A3L6 582 aaPredicted RBP20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 E9PAM4 449 aa20.35■□□□□ 0.85
CDC42BPB-201ENST00000361246 UBOX5O94941 541 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms