RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ARHGAP15Q53QZ3 475 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 CERCAMQ5T4B2 595 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 RAP1GAP2Q684P5 730 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 KIFC1Q9BW19 673 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 MANSC1Q9H8J5 431 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 UBP1Q9NZI7 540 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 TXNDC16Q9P2K2 825 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 ZNF197O14709 1029 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 KRT36O76013 467 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 LUC7L3O95232 432 aaKnown RBP13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 FGF19O95750 216 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 PEX11BO96011 259 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 HLA-DQB2P05538 268 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 TROVE2P10155 538 aaKnown RBP eCLIP13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 POU3F3P20264 500 aaPredicted RBP13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 SERPINB3P29508 390 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 ADRA1AP35348 466 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 CPA2P48052 419 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 HARS2P49590 506 aaKnown RBP13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 MPP3Q13368 585 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 DBN1Q16643 649 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 MUM1Q2TAK8 710 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 PARP15Q460N3 678 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 ALFQ53S48 1182 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 PCID2Q5JVF3 399 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 NADSYN1Q6IA69 706 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 PHC3Q8NDX5 983 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 DTX3LQ8TDB6 740 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 PTCD2Q8WV60 388 aaKnown RBP13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 IGSF8Q969P0 613 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 MYEOVQ96EZ4 313 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 FAM111AQ96PZ2 611 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 CFAP97Q9P2B7 532 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 ZNF212Q9UDV6 495 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 LRRC42Q9Y546 428 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 SHROOM3Q8TF72 1996 aa13.98□□□□□ -0.17
CSNK1E-201ENST00000359867 H3BQ06 376 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ATP9BO43861 1147 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 CNTN5O94779 1100 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 HAUS5O94927 633 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 PAPLNO95428 1278 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ERVK-10P10266 1014 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 RASSF2P50749 326 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 SLC7A9P82251 487 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 CCDC6Q16204 474 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 TFAP2DQ7Z6R9 452 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 NDUFAF2Q8N183 169 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 SPATA22Q8NHS9 363 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 PLD4Q96BZ4 506 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 HMCESQ96FZ2 354 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 RPRD1AQ96P16 312 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 CDX2Q99626 313 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 KLF11O14901 512 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ATP6V1C1P21283 382 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 TACR2P21452 398 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 FSHRP23945 695 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 SLC6A4P31645 630 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 CD151P48509 253 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ZBTB16Q05516 673 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 KPNB1Q14974 876 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 RCN1Q15293 331 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 MARC1Q5VT66 337 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 RINLQ6ZS11 566 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ARID3BQ8IVW6 561 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 NPAS3Q8IXF0 933 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 TEX26Q8N6G2 289 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 DNAJC9Q8WXX5 260 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 FGF13Q92913 245 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 USP13Q92995 863 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 AZIN2Q96A70 460 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ZNF419Q96HQ0 510 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 APOL2Q9BQE5 337 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 S1PR5Q9H228 398 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 MRM3Q9HC36 420 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 NSMCE4AQ9NXX6 385 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 ARMCX1Q9P291 453 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 AGO1Q9UL18 857 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 HELZP42694 1942 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 NYNRINQ9P2P1 1898 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 COL6A3P12111 3177 aa13.97□□□□□ -0.17
CSNK1E-201ENST00000359867 LEFTY2O00292 366 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 ACSL4O60488 711 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 GREM1O60565 184 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 MT-CYBP00156 380 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 IL1BP01584 269 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 ITGA2BP08514 1039 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 HOXB8P17481 243 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 BGNP21810 368 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 SPRP35270 261 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 SERPINB4P48594 390 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 IL10RBQ08334 325 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 CDHR3Q6ZTQ4 885 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 SH3RF2Q8TEC5 729 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 TSSK1BQ9BXA7 367 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 TMEM120AQ9BXJ8 343 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms