RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 TRPM8Q7Z2W7 1104 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PIGWQ7Z7B1 504 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 RBM23Q86U06 439 aaKnown RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 DCLK2Q8N568 766 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 KREMEN2Q8NCW0 462 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 OR6K2Q8NGY2 324 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 LRRC8CQ8TDW0 803 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 POF1BQ8WVV4 589 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF75CPQ92670 426 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 CLIP3Q96DZ5 547 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 MOCOSQ96EN8 888 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 TRPV5Q9NQA5 729 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 HCFC2Q9Y5Z7 792 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 USH1CQ9Y6N9 552 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 C2orf71A6NGG8 1288 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 GREM1O60565 184 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ZWINTO95229 277 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 MT-CO1P00395 513 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 GABRB3P28472 473 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 CCNFP41002 786 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 KPNA1P52294 538 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF789Q5FWF6 425 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SIRPB2Q5JXA9 342 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PLD6Q8N2A8 252 aaKnown RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SPATA6LQ8N4H0 392 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ABTB1Q969K4 478 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-202ENST00000358966 KLHL29Q96CT2 875 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 VPS11Q9H270 941 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ECT2Q9H8V3 914 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 PHTF1Q9UMS5 762 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 SLC4A7Q9Y6M7 1214 aa12.75□□□□□ -0.37
GGPS1-202ENST00000358966 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 VCANP13611 3396 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 K7ERQ8 282 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 EFCAB14O75071 495 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 UBOX5O94941 541 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 GSTA2P09210 222 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 MAPKAPK2P49137 400 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 IL10RBQ08334 325 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 DUS1LQ6P1R4 473 aaKnown RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 KLHDC10Q6PID8 442 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 LINC00523Q86TU6 105 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 OVCA2Q8WZ82 227 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 PLD4Q96BZ4 506 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 CFAP97Q9P2B7 532 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 FNDC3AQ9Y2H6 1198 aaKnown RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 ARL5AQ9Y689 179 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 PHGDHO43175 533 aaKnown RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 NPY2RP49146 381 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 ARSDP51689 593 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 CDH4P55283 916 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF177Q13360 481 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 PPIGQ13427 754 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 CAMK1Q14012 370 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 RABGAP1LQ5R372 815 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 PKN3Q6P5Z2 889 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 OTOAQ7RTW8 1153 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 TNS4Q8IZW8 715 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 BLOC1S5Q8TDH9 187 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 MYLIPQ8WY64 445 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 GBP5Q96PP8 586 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 NR1H4Q96RI1 486 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-202ENST00000358966 NAT9Q9BTE0 207 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 KIFC1Q9BW19 673 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 LRRC3Q9BY71 257 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 TLR9Q9NR96 1032 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 SNX15Q9NRS6 342 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 CHKBQ9Y259 395 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 TCAF1Q9Y4C2 921 aa12.74□□□□□ -0.37
GGPS1-202ENST00000358966 DENND4CQ5VZ89 1909 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 H0Y626 953 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 GRM6O15303 877 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 PRSS56P0CW18 603 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 EPCAMP16422 314 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 KCNA4P22459 653 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 TYK2P29597 1187 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 GP5P40197 560 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 ARF5P84085 180 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 CNPY1Q3B7I2 92 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 PCID2Q5JVF3 399 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 C9orf50Q5SZB4 431 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 LILRA6Q6PI73 481 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 MFSD6LQ8IWD5 586 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 KLHDC8BQ8IXV7 354 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 HIC2Q96JB3 615 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 RBBP8Q99708 897 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms