RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 NFKBIAP25963 317 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 TBX2Q13207 712 aaPredicted RBP20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 PAFAH1B3Q15102 231 aaKnown RBP20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 SMAD1Q15797 465 aaKnown RBP20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 MARC1Q5VT66 337 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 TP53I13Q8NBR0 393 aaPredicted RBP20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 OR4C6Q8NH72 309 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 SLC35G2Q8TBE7 412 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 NUDCD1Q96RS6 583 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 MGME1Q9BQP7 344 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 HAUS2Q9NVX0 235 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 INTUQ9ULD6 942 aa20.64■□□□□ 0.89
PPP1CA-202ENST00000358239 DMXL2Q8TDJ6 3036 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 TRAFD1O14545 582 aaPredicted RBP20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 C6P13671 934 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 CKMT2P17540 419 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 ITIH2P19823 946 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 CR2P20023 1033 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 IGFALSP35858 605 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 GJC1P36383 396 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 MMP13P45452 471 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 ACADVLP49748 655 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 LRRC14Q15048 493 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 PROX2Q3B8N5 592 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 ANKRD20A8PQ5CZ79 823 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 TIGD7Q6NT04 549 aaPredicted RBP20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 ZSWIM9Q86XI8 627 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 BTN2A2Q8WVV5 523 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 FAF2Q96CS3 445 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 DUSP23Q9BVJ7 150 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 SCUBE2Q9NQ36 999 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 SPTLC3Q9NUV7 552 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 NLGN3Q9NZ94 848 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 ASXL3Q9C0F0 2248 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 FREM2Q5SZK8 3169 aa20.63■□□□□ 0.89
PPP1CA-202ENST00000358239 TMEM110-MUSTN1A8MSY1 372 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 SCAMP1O15126 338 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 SIGLEC6O43699 453 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 ACP1P24666 158 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 GARSP41250 739 aaKnown RBP20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 LIG3P49916 1009 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 PEX5P50542 639 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 TAS2R40P59535 323 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 GALNT2Q10471 571 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 MMRN1Q13201 1228 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 DNAJC3Q13217 504 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 CCDC157Q569K6 752 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 NCBP2-AS2Q69YL0 99 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 MACC1Q6ZN28 852 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 TMPRSS12Q86WS5 348 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 VSIG1Q86XK7 387 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 PCDH19Q8TAB3 1148 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 RFFLQ8WZ73 363 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 FATE1Q969F0 183 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 EVA1BQ9NVM1 165 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 UCKL1Q9NWZ5 548 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 CSNK1G3Q9Y6M4 447 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 RP1P56715 2156 aa20.62■□□□□ 0.89
PPP1CA-202ENST00000358239 ZFC3H1O60293 1989 aaKnown RBP20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 ZNF487B1APH4 448 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 TRIM38O00635 465 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 HTRA2O43464 458 aaPredicted RBP20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 MFSD11O43934 449 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 LZTS3O60299 673 aaPredicted RBP20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 HNF1BP35680 557 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 MESDQ14696 234 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 TCEAL1Q15170 157 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 IRF4Q15306 451 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 ATP13A4Q4VNC1 1196 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 ZFYVE27Q5T4F4 411 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 DHRS13Q6UX07 377 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 DPPA4Q7L190 304 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 TEX26Q8N6G2 289 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 ZNF548Q8NEK5 533 aaPredicted RBP20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 TBATAQ96M53 351 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 USP29Q9HBJ7 922 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 AMACRQ9UHK6 382 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 ZZEF1O43149 2961 aa20.61■□□□□ 0.89
PPP1CA-202ENST00000358239 APC2O95996 2303 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 ARHGEF17Q96PE2 2063 aaPredicted RBP20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 PKD1L2Q7Z442 2459 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 FFAR2O15552 330 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 ELFN1P0C7U0 828 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 JUNDP17535 347 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 MX2P20592 715 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 SLC1A1P43005 524 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 DAB2P98082 770 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 RALGDSQ12967 914 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 IFI16Q16666 785 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 WSCD2Q2TBF2 565 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 ZNF542PQ5EBM4 170 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 CPNE8Q86YQ8 564 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 PGBD5Q8N414 524 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 ZCCHC14Q8WYQ9 949 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 TSGA13Q96PP4 275 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 POLR1EQ9GZS1 481 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 MBNL1Q9NR56 388 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 NCKIPSDQ9NZQ3 722 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 COQ6Q9Y2Z9 468 aa20.6■□□□□ 0.89
PPP1CA-202ENST00000358239 GIMD1P0DJR0 217 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms