RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 SIPA1Q96FS4 1042 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 MORF4L1Q9UBU8 362 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 POLR3HQ9Y535 204 aaPredicted RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 NEDD8-MDP1E9PL57 170 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SERPINA1P01009 418 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SLC6A2P23975 617 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 CCL23P55773 120 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 C15orf59Q2T9L4 293 aaPredicted RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 TMPRSS6Q8IU80 811 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 CFAP52Q8N1V2 620 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 POF1BQ8WVV4 589 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 ZHX1-C8orf76Q96EF9 292 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 PANX1Q96RD7 426 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 RNF208Q9H0X6 261 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 MARCH2Q9P0N8 246 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 UXTQ9UBK9 157 aaPredicted RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 ZSCAN5BA6NJL1 495 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SEPT4O43236 478 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 GAS2O43903 313 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 AP2A2O94973 939 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SCGB1D2O95969 90 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 OR52K2Q8NGK3 314 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SGCDQ92629 289 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 TMEM216Q9P0N5 145 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 BHMG1C9JSJ3 638 aaPredicted RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 TSPAN1O60635 241 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 CYP11B2P19099 503 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 LDLRAP1Q5SW96 308 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SMARCD3Q6STE5 483 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 RP9Q8TA86 221 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 AARSD1Q9BTE6 412 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 RNF121Q9H920 327 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 GNB5O14775 395 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 GP5P40197 560 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SNRPD1P62314 119 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 TXNL4AP83876 142 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 GIT2Q14161 759 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 CPSF6Q16630 551 aaKnown RBP eCLIP10.59□□□□□ -0.71
FXR1-202ENST00000357559 SLC45A4Q5BKX6 768 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 PRSS58Q8IYP2 241 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 UBR7Q8N806 425 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 CDYL2Q8N8U2 506 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 KCT2Q8NC54 265 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 LPPQ93052 612 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 SERPINB11Q96P15 392 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 ZNF224Q9NZL3 707 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 ARHGEF33A8MVX0 844 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 TSPAN4O14817 238 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 GLI1P08151 1106 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 DNASE1L3Q13609 305 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 VPS72Q15906 364 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 C5orf22Q49AR2 442 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 FNIP1Q8TF40 1166 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 DCLK3Q9C098 648 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 MCCC2Q9HCC0 563 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 USP42Q9H9J4 1324 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 LSM1O15116 133 aaKnown RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 RARGP13631 454 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 RBL1P28749 1068 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 GRIA4P48058 902 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 TOP3AQ13472 1001 aaPredicted RBP10.59□□□□□ -0.71
FXR1-202ENST00000357559 PLPP4Q5VZY2 271 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 B3GNT6Q6ZMB0 384 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 TNS4Q8IZW8 715 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 STARD8Q92502 1023 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 NYAP2Q9P242 653 aa10.59□□□□□ -0.71
FXR1-202ENST00000357559 A0A1W2PQ72 361 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 SNX20Q7Z614 316 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 QRFPRQ96P65 431 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 RRN3Q9NYV6 651 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 FAM237BA0A1B0GVD1 139 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 E5RJQ4 531 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 ULK1O75385 1050 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 UGT2B17O75795 530 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 CHN2P52757 468 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 GMFBP60983 142 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 PAGE2Q7Z2X7 111 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 C11orf24Q96F05 449 aaPredicted RBP10.58□□□□□ -0.72
FXR1-202ENST00000357559 NAT9Q9BTE0 207 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 INTS10Q9NVR2 710 aaKnown RBP10.58□□□□□ -0.72
FXR1-202ENST00000357559 CLIC5Q9NZA1 410 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 SIRPGQ9P1W8 387 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 ASF1AQ9Y294 204 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 TMEM5Q9Y2B1 443 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 CDC42BPBQ9Y5S2 1711 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 NR2C2P49116 596 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 PSMD5Q16401 504 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 MRPS23Q9Y3D9 190 aaKnown RBP10.58□□□□□ -0.72
FXR1-202ENST00000357559 ATP6AP2A0A1C7CYW4 349 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 NPEPPSL1A6NEC2 478 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 ATP6AP2O75787 350 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 ADORA2AP29274 412 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 TIMM50Q3ZCQ8 353 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 BHLHB9Q6PI77 547 aa10.58□□□□□ -0.72
FXR1-202ENST00000357559 TMPRSS11BQ86T26 416 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms