RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PLOD2O00469 737 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 C22orf31O95567 290 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 AP2A1O95782 977 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 MT-CYBP00156 380 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 GRIA3P42263 894 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 NAB1Q13506 487 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZYG11AQ6WRX3 759 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 LBX2Q6XYB7 198 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CCDC81Q6ZN84 652 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SETD3Q86TU7 594 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 IFNEQ86WN2 208 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CADM3Q8N126 398 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ELMOD1Q8N336 334 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ATP6V0D2Q8N8Y2 350 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TTC16Q8NEE8 873 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM110BQ8TC76 370 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CAPSLQ8WWF8 208 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SGIP1Q9BQI5 828 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TRIM8Q9BZR9 551 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 RNF38Q9H0F5 515 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SIK2Q9H0K1 926 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 VRTNQ9H8Y1 702 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 MARCH7Q9H992 704 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SETD4Q9NVD3 440 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 EGFL7Q9UHF1 273 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SFMBT1Q9UHJ3 866 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 MID2Q9UJV3 735 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 MYRFQ9Y2G1 1151 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 RNF11Q9Y3C5 154 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 DFFAO00273 331 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TRIM38O00635 465 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 BEST1O76090 585 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 AHSGP02765 367 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 NCAM1P13591 858 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 NR4A1P22736 598 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 NDST2P52849 883 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 FASTKQ14296 549 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 KCTD2Q14681 263 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC25A52Q3SY17 297 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CATSPER4Q7RTX7 472 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 PLPPR4Q7Z2D5 763 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TMEM135Q86UB9 458 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZDHHC17Q8IUH5 632 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CEP97Q8IW35 865 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CPNE9Q8IYJ1 553 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ESX1Q8N693 406 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TRUB1Q8WWH5 349 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 EDEM1Q92611 657 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 DLG3Q92796 817 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 KLRG1Q96E93 195 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 AASDHPPTQ9NRN7 309 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CRNNQ9UBG3 495 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CACNG4Q9UBN1 327 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ADAM28Q9UKQ2 775 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 V9GYQ6 96 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 RGPD3A6NKT7 1758 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 RGPD4Q7Z3J3 1758 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CROCCQ5TZA2 2017 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRSS51A0A1B0GVH4 220 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRORSD1PA6NEY8 169 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 A6NL46 340 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 A8MU76 341 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 C9IYK1 514 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 PSMD11O00231 422 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TSPAN1O60635 241 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CABYRO75952 493 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TOMM70O94826 608 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 MYO1DO94832 1006 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 INHBBP09529 407 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC35E2BP0CK96 405 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 STMN1P16949 149 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF26P17031 533 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ACADSBP45954 432 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 GLUD2P49448 558 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 MAP3K7CLP57077 242 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 GJA9P57773 515 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 BNIP3Q12983 259 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC12A1Q13621 1099 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 IKBKEQ14164 716 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TRIM25Q14258 630 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 KIF19Q2TAC6 998 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZBED5Q49AG3 693 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CLEC6AQ6EIG7 209 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZC3HC1Q86WB0 502 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 KIAA2013Q8IYS2 634 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 RYBPQ8N488 228 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 NPWQ8N729 165 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CYGBQ8WWM9 190 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAR2Q96K12 515 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 CNDP1Q96KN2 507 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 NXF3Q9H4D5 531 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 EIF2B3Q9NR50 452 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 DDIT4Q9NX09 232 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 STAP1Q9ULZ2 295 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 B3GNT3Q9Y2A9 372 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 USP3Q9Y6I4 520 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 COL11A1P12107 1806 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms