RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 WASF3Q9UPY6 502 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 FAM227AF5H4B4 570 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 H0YHG0 523 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 MBTPS2O43462 519 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 IL9P15248 144 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TNFRSF1BP20333 461 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 CAPN3P20807 821 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 IFRD2Q12894 506 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 CHI3L2Q15782 390 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 PRSS53Q2L4Q9 553 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 BRDTQ58F21 947 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 PAGE3Q5JUK9 113 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 LRRC66Q68CR7 880 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 IZUMO2Q6UXV1 221 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 NIPA1Q7RTP0 329 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TFAP2DQ7Z6R9 452 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 LZTR1Q8N653 840 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 STK32AQ8WU08 396 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 KCTD15Q96SI1 283 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 KLHDC3Q9BQ90 382 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 CLSTN3Q9BQT9 956 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TCHPQ9BT92 498 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 DNAI2Q9GZS0 605 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 VPS37BQ9H9H4 285 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 RXFP1Q9HBX9 757 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TMEM8AQ9HCN3 771 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 CROTQ9UKG9 612 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 PCDHB2Q9Y5E7 798 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 MGAM2Q2M2H8 2515 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 GOLGA6L9A6NEM1 432 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 KCNU1A8MYU2 1149 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TLR5O60602 858 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 FGFR1OPO95684 399 aaKnown RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 C2P06681 752 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 CTSHP09668 335 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 CSNK1DP48730 415 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 POLGP54098 1239 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 HADHBP55084 474 aaKnown RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 CDKN2DP55273 166 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 RWDD2BP57060 319 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 MCCD1P59942 119 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 SH3BP2P78314 561 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TMPRSS15P98073 1019 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 PLCL1Q15111 1095 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 ZBTB6Q15916 424 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 NADK2Q4G0N4 442 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 ZNF648Q5T619 568 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 FAM102AQ5T9C2 384 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 EGFL6Q8IUX8 553 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 C4orf19Q8IY42 314 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 LGI2Q8N0V4 545 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 NXNL1Q96CM4 212 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TRIM6Q9C030 488 aaPredicted RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 ACSS3Q9H6R3 686 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TPP1O14773 563 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 KCNN4O15554 427 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 KRT15P19012 456 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TACR1P25103 407 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 KCTD2Q14681 263 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 POU6F1Q14863 301 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TCEA2Q15560 299 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TSR1Q2NL82 804 aaKnown RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 C11orf91Q3C1V1 193 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 FSCBQ5H9T9 825 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 FBXO47Q5MNV8 452 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 C6orf10Q5SRN2 563 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 ITPRIPL1Q6GPH6 555 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TMEM154Q6P9G4 183 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 CTAGE3PQ8IX95 158 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 MMP21Q8N119 569 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 ZCCHC9Q8N567 271 aaKnown RBP5.69□□□□□ -1.5
CD47-201ENST00000355354 CCDC197Q8NCU1 140 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 RAD9AQ99638 391 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 TNKS2Q9H2K2 1166 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 PRDM16Q9HAZ2 1276 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 SLC38A7Q9NVC3 462 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 PLXNA2O75051 1894 aa5.69□□□□□ -1.5
CD47-201ENST00000355354 COL1A2P08123 1366 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 FAM47DPA6NHR8 397 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 SOCS2O14508 198 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 SNNO75324 88 aaPredicted RBP5.68□□□□□ -1.5
CD47-201ENST00000355354 ATP6V1B2P21281 511 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 AGXTP21549 392 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 NBL1P41271 181 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 CLCNKBP51801 687 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 NUBP1P53384 320 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 PFKPQ01813 784 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 CNPY1Q3B7I2 92 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 CENPUQ71F23 418 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 NLRP8Q86W28 1048 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 ARHGAP12Q8IWW6 846 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 ADHFE1Q8IWW8 467 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 CCDC26Q8TAB7 109 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 FAM172AQ8WUF8 416 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
CD47-201ENST00000355354 UHRF1Q96T88 793 aaPredicted RBP5.68□□□□□ -1.5
CD47-201ENST00000355354 LRMDAQ9H2I8 198 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 CHRDQ9H2X0 955 aa5.68□□□□□ -1.5
CD47-201ENST00000355354 INTS7Q9NVH2 962 aaKnown RBP5.68□□□□□ -1.5
CD47-201ENST00000355354 SIRT5Q9NXA8 310 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms