RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DUSP6Q16828 381 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 PLEKHG6Q3KR16 790 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 N4BP2L1Q5TBK1 243 aaPredicted RBP17.31■□□□□ 0.36
VPS13B-201ENST00000355155 MBLAC2Q68D91 279 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 MFSD6LQ8IWD5 586 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 TMEM151AQ8N4L1 468 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 STON2Q8WXE9 905 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 ADGRE3Q9BY15 652 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 C12orf65Q9H3J6 166 aaKnown RBP17.31■□□□□ 0.36
VPS13B-201ENST00000355155 VPS28Q9UK41 221 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 PPIL1Q9Y3C6 166 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 A0A096LPK6 155 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 TTC24A2A3L6 582 aaPredicted RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 ZNF821O75541 412 aaPredicted RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 CA8P35219 290 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 GRIA4P48058 902 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 PCLAFQ15004 111 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 TTC30BQ8N4P2 665 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 ARMC2Q8NEN0 867 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 SIKE1Q9BRV8 207 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 SLC13A1Q9BZW2 595 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 PRDM4Q9UKN5 801 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 INTS6Q9UL03 887 aaKnown RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 TARM1B6A8C7 271 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 TRAFD1O14545 582 aaPredicted RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 H2AFYO75367 372 aaKnown RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 S1PR4O95977 384 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 ATP5BP06576 529 aaKnown RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 SYN1P17600 705 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 TRAF2Q12933 501 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 DENND6AQ8IWF6 608 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 APCDD1Q8J025 514 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 E2F7Q96AV8 911 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 TUBGCP5Q96RT8 1024 aa17.3■□□□□ 0.36
VPS13B-201ENST00000355155 CDCA3Q99618 268 aaPredicted RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 INTS10Q9NVR2 710 aaKnown RBP17.3■□□□□ 0.36
VPS13B-201ENST00000355155 RFPL2O75678 378 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 SLC35E2BP0CK96 405 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 FGF3P11487 239 aaPredicted RBP17.29■□□□□ 0.36
VPS13B-201ENST00000355155 RAB10P61026 200 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 GPM6BQ13491 265 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 SEPT6Q14141 434 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 GBP7Q8N8V2 638 aaPredicted RBP17.29■□□□□ 0.36
VPS13B-201ENST00000355155 DDI1Q8WTU0 396 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 GPR78Q96P69 363 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 TCF12Q99081 682 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 TSSK1BQ9BXA7 367 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 SLCO1B3Q9NPD5 702 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 TMEM216Q9P0N5 145 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 FAM95CA0A1B0GW59 222 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 ANKRD66B4E2M5 251 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 AVPR1AP37288 418 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 ARSDP51689 593 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 MPP1Q00013 466 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 TSNAXIP1Q2TAA8 658 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 ACTR5Q9H9F9 607 aaPredicted RBP17.29■□□□□ 0.36
VPS13B-201ENST00000355155 SPO11Q9Y5K1 396 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 USH1CQ9Y6N9 552 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 GJA1P17302 382 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 BGNP21810 368 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 GRK2P25098 689 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 ALDH3A1P30838 453 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 SCNN1BP51168 640 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 CES4AQ5XG92 561 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 ZNF470Q6ECI4 717 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 NUDCD3Q8IVD9 361 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 ACVR1CQ8NER5 493 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 LYSMD1Q96S90 227 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 CCL26Q9Y258 94 aa17.29■□□□□ 0.36
VPS13B-201ENST00000355155 KIAA1549LQ6ZVL6 1849 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 G3V2L1 256 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 SLC9A3R1O14745 358 aaPredicted RBP17.28■□□□□ 0.36
VPS13B-201ENST00000355155 PGLSO95336 258 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 SULT2A1Q06520 285 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 PPM1JQ5JR12 505 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 PITRM1Q5JRX3 1037 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 FAM91A1Q658Y4 838 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 AFTPHQ6ULP2 937 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 SPRED2Q7Z698 418 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CMC1Q7Z7K0 106 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.28■□□□□ 0.36
VPS13B-201ENST00000355155 MDGA1Q8NFP4 955 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 IRF7Q92985 503 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 HDAC10Q969S8 669 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CPEB1Q9BZB8 566 aaKnown RBP17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CLEC4EQ9ULY5 219 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 RRP15Q9Y3B9 282 aaKnown RBP17.28■□□□□ 0.36
VPS13B-201ENST00000355155 MUC22E2RYF6 1773 aaPredicted RBP17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CA3P07451 260 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 MYOGP15173 224 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 RHOAP61586 193 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 IFT88Q13099 833 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 GALNT3Q14435 633 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 C9orf50Q5SZB4 431 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 TMEM184AQ6ZMB5 413 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 PLD6Q8N2A8 252 aaKnown RBP17.28■□□□□ 0.36
VPS13B-201ENST00000355155 PIH1D2Q8WWB5 315 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms