RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 MYBPC1Q00872 1141 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 DPYSL3Q14195 570 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 OXA1LQ15070 435 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 NOMO1Q15155 1222 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 FSCBQ5H9T9 825 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 FAM205BPQ63HN1 556 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 CLIP4Q8N3C7 705 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 SLC4A11Q8NBS3 891 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 JOSD2Q8TAC2 188 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TBC1D15Q8TC07 691 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 THAP11Q96EK4 314 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 PANX3Q96QZ0 392 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 MSTO1Q9BUK6 570 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 C1orf21Q9H246 121 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 PADI4Q9UM07 663 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 ARHGAP26Q9UNA1 814 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 B3GNT3Q9Y2A9 372 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 AP3M1Q9Y2T2 418 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 SGK1O00141 431 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 SLC22A1O15245 554 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 CSDE1O75534 798 aaKnown RBP10.9□□□□□ -0.66
SND1-201ENST00000354725 PIGNO95427 931 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 OLFM2O95897 454 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 S100A6P06703 90 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
SND1-201ENST00000354725 NFE2L1Q14494 772 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 SNX17Q15036 470 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 MINDY4Q4G0A6 757 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 HP1BP3Q5SSJ5 553 aaPredicted RBP10.9□□□□□ -0.66
SND1-201ENST00000354725 PXDC1Q5TGL8 231 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 AGAP7PQ5VUJ5 663 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 IYDQ6PHW0 289 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 CDHR3Q6ZTQ4 885 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 ICA1LQ8NDH6 482 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 PPTC7Q8NI37 304 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TMIGD2Q96BF3 282 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TMEM120AQ9BXJ8 343 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 C12orf65Q9H3J6 166 aaKnown RBP10.9□□□□□ -0.66
SND1-201ENST00000354725 KCNK4Q9NYG8 393 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 SAE1Q9UBE0 346 aaPredicted RBP10.9□□□□□ -0.66
SND1-201ENST00000354725 HEY2Q9UBP5 337 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 PCDHGB4Q9UN71 923 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 IGKV6-21A0A0C4DH24 114 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 MYOCOSA0A1B0GUC4 107 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 HMX2A2RU54 273 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 FAM172BPA6NC97 362 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 CFAP99D6REC4 459 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 J3QRK9 145 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 HAS3O00219 553 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 GDI1P31150 447 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TNFSF9P41273 254 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 NR4A2P43354 598 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 RGS19P49795 217 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TNFAIP2Q03169 654 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 ITGADQ13349 1161 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 CCINQ13939 588 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 RHPN2Q8IUC4 686 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 OR6P1Q8NGX9 317 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 GDPD5Q8WTR4 605 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 FBXL8Q96CD0 374 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 GPR20Q99678 358 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 TARS2Q9BW92 718 aaKnown RBP10.9□□□□□ -0.66
SND1-201ENST00000354725 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 UBA2Q9UBT2 640 aaPredicted RBP10.9□□□□□ -0.66
SND1-201ENST00000354725 APPL1Q9UKG1 709 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 RFPL1O75677 317 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 CIB2O75838 187 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 FDFT1P37268 417 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 NKX2-5P52952 324 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 MRPS15P82914 257 aaKnown RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 TMPRSS15P98073 1019 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TUBB3Q13509 450 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 DENND1BQ6P3S1 775 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 XKR5Q6UX68 686 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ADAMTSL2Q86TH1 951 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 SLC22A9Q8IVM8 553 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 C7orf61Q8IZ16 206 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ATP2A3Q93084 1043 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ACSF2Q96CM8 615 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 OXNAD1Q96HP4 312 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 PEBP4Q96S96 227 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 SLC29A1Q99808 456 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 BBS2Q9BXC9 721 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ZNF717Q9BY31 904 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 POPDC2Q9HBU9 364 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 SLC35C2Q9NQQ7 365 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TJP2Q9UDY2 1190 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TYW5A2RUC4 315 aaKnown RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 ZNF487B1APH4 448 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ZBTB42B2RXF5 422 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 CST8O60676 142 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 BMP10O95393 424 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 PEX2P28328 305 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 PKLRP30613 574 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 CREB5Q02930 508 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms