RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 NDUFS2O75306 463 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 CTRB1P17538 263 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 GTF2E2P29084 291 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 RRM2P31350 389 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 FMO4P31512 558 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 CD68P34810 354 aaPredicted RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 RARRES1P49788 294 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 HSPA2P54652 639 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 TAP1Q03518 808 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 GABPAQ06546 454 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 HSPA14Q0VDF9 509 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 FASTKQ14296 549 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 SLFN13Q68D06 897 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 CTRB2Q6GPI1 263 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 TOR1AIP2Q8NFQ8 470 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 PEX13Q92968 403 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 MUL1Q969V5 352 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 PMEPA1Q969W9 287 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 TTYH2Q9BSA4 534 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.28
IFT88-202ENST00000351808 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 TLR9Q9NR96 1032 aa13.33□□□□□ -0.28
IFT88-202ENST00000351808 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 A0A096LPK6 155 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 TK2O00142 265 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 VNN1O95497 513 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 CD4P01730 458 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 OR3A3P47888 321 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 SESN2P58004 480 aaPredicted RBP13.32□□□□□ -0.28
IFT88-202ENST00000351808 BNIP2Q12982 314 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 DUSP7Q16829 419 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 FAM102BQ5T8I3 360 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 BSPRYQ5W0U4 402 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 GPAT2Q6NUI2 795 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 IL17RDQ8NFM7 739 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 OR13J1Q8NGT2 312 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 LRCH3Q96II8 777 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 BTBD2Q9BX70 525 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 MKRN2Q9H000 416 aaKnown RBP13.32□□□□□ -0.28
IFT88-202ENST00000351808 NARFLQ9H6Q4 476 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 RPRD1BQ9NQG5 326 aaKnown RBP13.32□□□□□ -0.28
IFT88-202ENST00000351808 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
IFT88-202ENST00000351808 A0A0X1KG70 313 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 C12orf71A8MTZ7 269 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 NDST3O95803 873 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 SOX11P35716 441 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 MAGEA6P43360 314 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 FCHO2Q0JRZ9 810 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 ZACNQ401N2 412 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 Q5BKY6 102 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 COLEC12Q5KU26 742 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
IFT88-202ENST00000351808 ADGRG5Q8IZF4 528 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 GPD1LQ8N335 351 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 OR9I1Q8NGQ6 314 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 SDCCAG3Q96C92 435 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 IDI2Q9BXS1 227 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 CCDC90BQ9GZT6 254 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
IFT88-202ENST00000351808 VTI1BQ9UEU0 232 aa13.32□□□□□ -0.28
IFT88-202ENST00000351808 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 A0A0G2JMP0 313 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 A0A1W2PQ72 361 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 PTGES3LE9PB15 166 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 SDHDO14521 159 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 CES1P23141 567 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 PKLRP30613 574 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 HTR2BP41595 481 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 PGGT1BP53609 377 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 CBX2Q14781 532 aaPredicted RBP13.31□□□□□ -0.28
IFT88-202ENST00000351808 IDO2Q6ZQW0 420 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 FAM35AQ86V20 835 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 TRPV3Q8NET8 790 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 BIRC7Q96CA5 298 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 PGLYRP2Q96PD5 576 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 KCTD14Q9BQ13 255 aaPredicted RBP13.31□□□□□ -0.28
IFT88-202ENST00000351808 LTB4R2Q9NPC1 389 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 TOR4AQ9NXH8 423 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 CFBP00751 764 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
IFT88-202ENST00000351808 PTGS2P35354 604 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 SIK1P57059 783 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 NCS1P62166 190 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 RAB6CQ53S08 254 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 BRMS1LQ5PSV4 323 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 FAM205BPQ63HN1 556 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 CYS1Q717R9 158 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 GDPD3Q7L5L3 318 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 DYNC2LI1Q8TCX1 351 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 PHF10Q8WUB8 498 aaKnown RBP13.31□□□□□ -0.28
IFT88-202ENST00000351808 MYRFLQ96LU7 910 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 RAB6CQ9H0N0 254 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms