RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ARIH1Q9Y4X5 557 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 SLCO1B7G3V0H7 640 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 AURKAO14965 403 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 DLX3O60479 287 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 RPP40O75818 363 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 LATS1O95835 1130 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 S1PR4O95977 384 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 URODP06132 367 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 EZRP15311 586 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ARSDP51689 593 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 PGGT1BP53609 377 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 PRKAA1Q13131 559 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF789Q5FWF6 425 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 HECTD2Q5U5R9 776 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 METTL21CQ5VZV1 264 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 DDX53Q86TM3 631 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 BLOC1S5Q8TDH9 187 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 HEXDCQ8WVB3 486 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 STON2Q8WXE9 905 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 NUDCD1Q96RS6 583 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 TRIB3Q96RU7 358 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 COG4Q9H9E3 785 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 STOML2Q9UJZ1 356 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 CORO1CQ9ULV4 474 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ATP11BQ9Y2G3 1177 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 VWA7Q9Y334 891 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 KCTD3Q9Y597 815 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 PRRG1O14668 218 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 NPHS1O60500 1241 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 MAGEC1O60732 1142 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 DIAPH2O60879 1101 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 GLP2RO95838 553 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 LMNAP02545 664 aaKnown RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 LTA4HP09960 611 aaKnown RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 ATP5F1P24539 256 aaPredicted RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 SERPINB5P36952 375 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 SLC26A3P40879 764 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 RPL14P50914 215 aaKnown RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 EPHB3P54753 998 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 NAGLUP54802 743 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 DNAJB13P59910 316 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 NSUN2Q08J23 767 aaKnown RBP eCLIP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 USP4Q13107 963 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 UBAP2LQ14157 1087 aaKnown RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 PREPLQ4J6C6 727 aaPredicted RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 DNAL1Q4LDG9 190 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 WLSQ5T9L3 541 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 FAM45BPQ6NSW5 357 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 KLC3Q6P597 504 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF783Q6ZMS7 281 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 DNAJB7Q7Z6W7 309 aaPredicted RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 TCEAL8Q8IYN2 117 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 CMTR2Q8IYT2 770 aaKnown RBP16.78■□□□□ 0.28
SAMM50-201ENST00000350028 FAM45AQ8TCE6 357 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 CCDC126Q96EE4 140 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 TBATAQ96M53 351 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 OLFM1Q99784 485 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 C1orf21Q9H246 121 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 IGSF5Q9NSI5 407 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
SAMM50-201ENST00000350028 LTBP2Q14767 1821 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 C2orf78A6NCI8 922 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 INSIG1O15503 277 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 TSPAN3O60637 253 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 GJB3O75712 270 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 PIGNO95427 931 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 CRTAMO95727 393 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 RBP1P09455 135 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 IRF1P10914 325 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 CR2P20023 1033 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 TWF1Q12792 350 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 GALNT3Q14435 633 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 CYTH1Q15438 398 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 FSCBQ5H9T9 825 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 MRNIPQ6NTE8 343 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 NDNQ99608 321 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 DENND2DQ9H6A0 471 aaPredicted RBP16.77■□□□□ 0.28
SAMM50-201ENST00000350028 RNPEPL1Q9HAU8 725 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 RC3H2Q9HBD1 1191 aaKnown RBP16.77■□□□□ 0.28
SAMM50-201ENST00000350028 SCUBE2Q9NQ36 999 aa16.77■□□□□ 0.28
SAMM50-201ENST00000350028 MATN2O00339 956 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 HDAC3O15379 428 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 PEX11AO75192 247 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 GOT2P00505 430 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CLTBP09497 229 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 MBL2P11226 248 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 OGNP20774 298 aaKnown RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 PGM1P36871 562 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CPA2P48052 419 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 SGSHP51688 502 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 KDSRQ06136 332 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 CSHL1Q14406 222 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 E2F5Q15329 346 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 ARL13AQ5H913 290 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-201ENST00000350028 TECRLQ5HYJ1 363 aa16.76■□□□□ 0.27
SAMM50-201ENST00000350028 VWA5B1Q5TIE3 1220 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms