RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PPIL2Q13356 520 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 INTS11Q5TA45 600 aaKnown RBP18.77■□□□□ 0.6
SCARF1-202ENST00000348987 MFSD4BQ5TF39 518 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 NCBP2-AS2Q69YL0 99 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 TP53INP2Q8IXH6 220 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 ALPK1Q96QP1 1244 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 UNKQ9C0B0 810 aaKnown RBP18.77■□□□□ 0.6
SCARF1-202ENST00000348987 GBA3Q9H227 469 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 SEPT10Q9P0V9 454 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 CROTQ9UKG9 612 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 CCDC162PA2VCL2 907 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 PHGDHO43175 533 aaKnown RBP18.77■□□□□ 0.6
SCARF1-202ENST00000348987 GNL1P36915 607 aaPredicted RBP18.77■□□□□ 0.6
SCARF1-202ENST00000348987 GRSF1Q12849 480 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCARF1-202ENST00000348987 SPANXN3Q5MJ09 141 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 NEPROQ6NW34 567 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 SNX29P2Q8IUI4 249 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 PACRGLQ8N7B6 248 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 BPIFB6Q8NFQ5 453 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 OR52K1Q8NGK4 314 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 HERC2P3Q9BVR0 1158 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 TMEM9Q9P0T7 183 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 OAZ3Q9UMX2 235 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 SLC27A5Q9Y2P5 690 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 B4GAT1O43505 415 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 NDUFB5O43674 189 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 S100A1P23297 94 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 AVPR1AP37288 418 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 FASTKQ14296 549 aaKnown RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 PHKG1Q16816 387 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 PELI3Q8N2H9 469 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 ADAMTS10Q9H324 1103 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 TMEM181Q9P2C4 612 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 SARDHQ9UL12 918 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 TANC1Q9C0D5 1861 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 SYNJ2BP-COX16A0A087WUM0 186 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 H3BRB1 525 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 CABYRO75952 493 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 STAU1O95793 577 aaKnown RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 OPRL1P41146 370 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 NR2C2P49116 596 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 SAMD4BQ5PRF9 694 aaKnown RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 OR13F1Q8NGS4 319 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 SEPT8Q92599 483 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 GLT1D1Q96MS3 346 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 OMDQ99983 421 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 FAM49AQ9H0Q0 323 aaPredicted RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 FANCEQ9HB96 536 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 CCM2LQ9NUG4 571 aaPredicted RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 COX16Q9P0S2 106 aa18.76■□□□□ 0.59
SCARF1-202ENST00000348987 RUVBL2Q9Y230 463 aaKnown RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
SCARF1-202ENST00000348987 CXCL11O14625 94 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 MRASO14807 208 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 AKAP5P24588 427 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 ZBTB17Q13105 803 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 BFSP2Q13515 415 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 SPPL2CQ8IUH8 684 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 SPATA6LQ8N4H0 392 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 KCTD4Q8WVF5 259 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 CENPIQ92674 756 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 MFSD3Q96ES6 412 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 FEM1CQ96JP0 617 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 MAELQ96JY0 434 aaKnown RBP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 CSF3RQ99062 836 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 MROQ9BYG7 248 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 KLHL25Q9H0H3 589 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 SEPT3Q9UH03 358 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 MID2Q9UJV3 735 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 RNF103O00237 685 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 EI24O14681 340 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 DLX3O60479 287 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 EEF1B2P24534 225 aaKnown RBP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 GSSP48637 474 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 TMBIM6P55061 237 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 LAMC2Q13753 1193 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 PPP1R3AQ16821 1122 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 PIGZQ86VD9 579 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 FSTL5Q8N475 847 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 OR9I1Q8NGQ6 314 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 ZC3H15Q8WU90 426 aaKnown RBP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 VPS39Q96JC1 886 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 C1QTNF1Q9BXJ1 281 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 NXF3Q9H4D5 531 aaKnown RBP18.75■□□□□ 0.59
SCARF1-202ENST00000348987 SIAEQ9HAT2 523 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 TLK1Q9UKI8 766 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 KCNH4Q9UQ05 1017 aa18.75■□□□□ 0.59
SCARF1-202ENST00000348987 A8MU76 341 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 PFDN6O15212 129 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 MFSD11O43934 449 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 DDHD2O94830 711 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 HSPA8P11142 646 aaKnown RBP18.74■□□□□ 0.59
SCARF1-202ENST00000348987 HNRNPLP14866 589 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SLC26A9Q7LBE3 791 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 CMTR2Q8IYT2 770 aaKnown RBP18.74■□□□□ 0.59
SCARF1-202ENST00000348987 ANKRD52Q8NB46 1076 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 SNX19Q92543 992 aa18.74■□□□□ 0.59
SCARF1-202ENST00000348987 HGH1Q9BTY7 390 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms