RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 THOP1P52888 689 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 CDH6P55285 790 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 AP1S1P61966 158 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 DAB2P98082 770 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 BCL2L1Q07817 233 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 RALGDSQ12967 914 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 ILKQ13418 452 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 KRT81Q14533 505 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 ZNF235Q14590 738 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 WSCD2Q2TBF2 565 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 SPECC1LQ69YQ0 1117 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 PGBD5Q8N414 524 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 ATPAF2Q8N5M1 289 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 APOLD1Q96LR9 279 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 ZNF599Q96NL3 588 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 C1QTNF7Q9BXJ2 289 aa13.39□□□□□ -0.27
CLCC1-202ENST00000348264 RALYQ9UKM9 306 aaKnown RBP13.39□□□□□ -0.27
CLCC1-202ENST00000348264 COL27A1Q8IZC6 1860 aaPredicted RBP13.39□□□□□ -0.27
CLCC1-202ENST00000348264 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 LOC400499M0QZD8 3231 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 AQP9O43315 295 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 CBFA2T2O43439 604 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 MFSD11O43934 449 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 MAFKO60675 156 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 ALPPL2P10696 532 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 CKMT1AP12532 417 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 JUPP14923 745 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 CR2P20023 1033 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 IL4RP24394 825 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 SERPINB6P35237 376 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 LIG3P49916 1009 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 RENBPP51606 427 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 ARSEP51690 589 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 YPEL5P62699 121 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 INSM1Q01101 510 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 CYP4F3Q08477 520 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 NSUN2Q08J23 767 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 TRIM14Q14142 442 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 LRRC14Q15048 493 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 KIF26BQ2KJY2 2108 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 ASTE1Q2TB18 679 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 DEFB133Q30KQ1 61 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 ATP13A4Q4VNC1 1196 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 VSTM4Q8IW00 320 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 PHACTR4Q8IZ21 702 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 RNF214Q8ND24 703 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 LMX1AQ8TE12 382 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 RFFLQ8WZ73 363 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 LRRC61Q9BV99 259 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 TSPY26PQ9H489 355 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 CTTNBP2NLQ9P2B4 639 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 RCOR3Q9P2K3 495 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 DKK4Q9UBT3 224 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 APOBEC3BQ9UH17 382 aaKnown RBP13.38□□□□□ -0.27
CLCC1-202ENST00000348264 ADAMTS20P59510 1910 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 PTPRQQ9UMZ3 2332 aa13.38□□□□□ -0.27
CLCC1-202ENST00000348264 NEMP2A6NFY4 417 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 GCATO75600 419 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 PROSCO94903 275 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 PCCBP05166 539 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 GM2AP17900 193 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 TAS2R40P59535 323 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 TARDBPQ13148 414 aaKnown RBP eCLIP13.37□□□□□ -0.275e-6■□□□□ 8.4
CLCC1-202ENST00000348264 DPYSL3Q14195 570 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 PTK2BQ14289 1009 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 AGERQ15109 404 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 PRRT3Q5FWE3 981 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 DPPA4Q7L190 304 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 OR8K1Q8NGG5 319 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
CLCC1-202ENST00000348264 MGME1Q9BQP7 344 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 DUSP23Q9BVJ7 150 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 UVRAGQ9P2Y5 699 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 RAXQ9Y2V3 346 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 CSNK1G3Q9Y6M4 447 aa13.37□□□□□ -0.27
CLCC1-202ENST00000348264 SSU72P8A0A1W2PR75 194 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 TOR1BO14657 336 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 HTRA2O43464 458 aaPredicted RBP13.36□□□□□ -0.27
CLCC1-202ENST00000348264 LZTS3O60299 673 aaPredicted RBP13.36□□□□□ -0.27
CLCC1-202ENST00000348264 MFAP3LO75121 409 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 CELA2BP08218 269 aaPredicted RBP13.36□□□□□ -0.27
CLCC1-202ENST00000348264 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 ELFN1P0C7U0 828 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 HSPA9P38646 679 aaKnown RBP13.36□□□□□ -0.27
CLCC1-202ENST00000348264 MMP13P45452 471 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 MAXP61244 160 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 TRAF2Q12933 501 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 C1orf61Q13536 156 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 INPP5AQ14642 412 aa13.36□□□□□ -0.27
CLCC1-202ENST00000348264 HADHQ16836 314 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms